RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 PRAP1Q96NZ9 151 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 OR2A5Q96R48 311 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 ZFYVE21Q9BQ24 234 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 DPH1Q9BZG8 443 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 CD244Q9BZW8 370 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 FAM117AQ9C073 453 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 MRPL46Q9H2W6 279 aaKnown RBP9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 EHD1Q9H4M9 534 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 PELI2Q9HAT8 420 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 CUEDC1Q9NWM3 386 aaPredicted RBP9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 TMEM216Q9P0N5 145 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 SH2B3Q9UQQ2 575 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 TNPO3Q9Y5L0 923 aaKnown RBP9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 AP1M2Q9Y6Q5 423 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 CACNA1GO43497 2377 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 ANKRD11Q6UB99 2663 aaPredicted RBP9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 A0A087WV48 116 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 TLDC2A0PJX2 215 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 NCF1BA6NI72 391 aaPredicted RBP9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 NCF1CA8MVU1 366 aaPredicted RBP9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 SUPT3HB4E1H0 165 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 TMEM150CB9EJG8 249 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 E7EQ34 232 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 STMND1H3BQB6 276 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 STX16-NPEPL1H3BU86 382 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 AGRPO00253 132 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 TAF4O00268 1085 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 TXNDC9O14530 226 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 STX16O14662 325 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 GLRA3O75311 464 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 SUPT3HO75486 399 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 STK17BO94768 372 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 WDR47O94967 919 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 TIAF1O95411 115 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 HBQ1P09105 142 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 LIPCP11150 499 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 NCF1P14598 390 aaPredicted RBP9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 ZNF28P17035 718 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 KRT15P19012 456 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 CRHR1P34998 444 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 EIF2S3P41091 472 aaKnown RBP9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 CASP2P42575 452 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 GDF5P43026 501 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 GLRBP48167 497 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 CCT5P48643 541 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 HSPA7P48741 367 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 RPS15AP62244 130 aaKnown RBP9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 NFKB2Q00653 900 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 ZNF844Q08AG5 666 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 CDC16Q13042 620 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 TSTA3Q13630 321 aaPredicted RBP9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 TBCCQ15814 346 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 C18orf21Q32NC0 220 aaPredicted RBP9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 LRIG3Q6UXM1 1119 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 SLCO4C1Q6ZQN7 724 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 LRRC70Q7Z2Q7 622 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 GPR135Q8IZ08 494 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 SLC5A11Q8WWX8 675 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 ZCCHC14Q8WYQ9 949 aaKnown RBP9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 NKD1Q969G9 470 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 TM4SF19Q96DZ7 209 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 ZIM3Q96PE6 472 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 CTRCQ99895 268 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 C1QTNF3Q9BXJ4 246 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 PITHD1Q9GZP4 211 aaPredicted RBP9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 NT5DC2Q9H857 520 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 PCMTD2Q9NV79 361 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 DNAJC11Q9NVH1 559 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 WWOXQ9NZC7 414 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 XPR1Q9UBH6 696 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 GRID1Q9ULK0 1009 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 DYRK1BQ9Y463 629 aa9.22□□□□□ -0.93
RABGGTA-221ENST00000561055 PTPRQQ9UMZ3 2332 aa9.21□□□□□ -0.93
RABGGTA-221ENST00000561055 TRBC2A0A5B9 178 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 SMIM23A6NLE4 172 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 GOLGA8RI6L899 631 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 K7EPI3 171 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 TK2O00142 265 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 E2F3O00716 465 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 HAT1O14929 419 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 NRP2O60462 931 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 PRAMEF4O60810 478 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 SCRG1O75711 98 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 OR2B3O76000 313 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 WFS1O76024 890 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 ONECUT2O95948 504 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 C1GALT1C1LP0DN25 315 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 CDH1P12830 882 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 KRT4P19013 534 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 EPORP19235 508 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 RORAP35398 523 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 GRK3P35626 688 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 CCR8P51685 355 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 ARSFP54793 590 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 ABHD18Q0P651 414 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 PFKFB4Q16877 469 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 PRTGQ2VWP7 1150 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 FAM214AQ32MH5 1076 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 CCDC153Q494R4 210 aa9.21□□□□□ -0.94
RABGGTA-221ENST00000561055 WASHC2DQ5SRD0 308 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms