RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 PTCHD3Q3KNS1 767 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 TUBB8Q3ZCM7 444 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 HHATQ5VTY9 493 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 PRAMEF9Q5VWM5 478 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 DUS1LQ6P1R4 473 aaKnown RBP5.28□□□□□ -1.56
ZEB1-220ENST00000560909 MBOAT1Q6ZNC8 495 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 RNF165Q6ZSG1 346 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 FRMD7Q6ZUT3 714 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 GLRX5Q86SX6 157 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 PIP4P1Q86T03 277 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 AMIGO1Q86WK6 493 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 TREML1Q86YW5 311 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 NUDCD3Q8IVD9 361 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 HOMEZQ8IX15 550 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 LSMEM2Q8N112 164 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 CARFQ8N187 725 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 FBXO39Q8N4B4 442 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 CHCHD4Q8N4Q1 142 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 PTGR2Q8N8N7 351 aaPredicted RBP5.28□□□□□ -1.56
ZEB1-220ENST00000560909 LMNTD1Q8N9Z9 388 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 L3MBTL4Q8NA19 623 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 KYQ8NBH2 561 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 OR4K1Q8NGD4 311 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 OR52E1Q8NGJ3 308 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 OR2A1Q8NGT9 310 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 OR2I1PQ8NGU4 316 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 CFAP61Q8NHU2 1237 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 FAM76AQ8TAV0 307 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 MAPK15Q8TD08 544 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 SMPDL3AQ92484 453 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 ZNF75CPQ92670 426 aaPredicted RBP5.28□□□□□ -1.56
ZEB1-220ENST00000560909 CXorf40BQ96DE9 158 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 SCYL1Q96KG9 808 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 CNDP1Q96KN2 507 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 MAGEB18Q96M61 343 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 ZNF317Q96PQ6 595 aaPredicted RBP5.28□□□□□ -1.56
ZEB1-220ENST00000560909 TMEM237Q96Q45 408 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 OR4K3Q96R72 315 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 FERD3LQ96RJ6 166 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 MIPEPQ99797 713 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 NTMT1Q9BV86 223 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.28□□□□□ -1.56
ZEB1-220ENST00000560909 PITPNM3Q9BZ71 974 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 DRC3Q9H069 523 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 IQCGQ9H095 443 aaKnown RBP5.28□□□□□ -1.56
ZEB1-220ENST00000560909 PCBD2Q9H0N5 130 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 SMOC1Q9H4F8 434 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 EHD1Q9H4M9 534 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 GSTO2Q9H4Y5 243 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 SLC32A1Q9H598 525 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 ZBTB26Q9HCK0 441 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 IMP3Q9NV31 184 aaKnown RBP5.28□□□□□ -1.56
ZEB1-220ENST00000560909 INTS9Q9NV88 658 aaKnown RBP5.28□□□□□ -1.56
ZEB1-220ENST00000560909 INTS7Q9NVH2 962 aaKnown RBP5.28□□□□□ -1.56
ZEB1-220ENST00000560909 ARL15Q9NXU5 204 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 GPRC5BQ9NZH0 403 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 OGFRQ9NZT2 677 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 LNPEPQ9UIQ6 1025 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 ZNF225Q9UK10 706 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 PADI4Q9UM07 663 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.28□□□□□ -1.56
ZEB1-220ENST00000560909 TSC22D4Q9Y3Q8 395 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 ENTPD2Q9Y5L3 495 aa5.28□□□□□ -1.56
ZEB1-220ENST00000560909 CFAP20Q9Y6A4 193 aaKnown RBP5.28□□□□□ -1.56
ZEB1-220ENST00000560909 KCNE1BA0A087WTH5 132 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 IGHV1OR21-1A0A087WYE8 117 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 KRT87PA6NCN2 255 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 OR5K3A6NET4 321 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 LRRC14BA6NHZ5 514 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 TMEM114B3SHH9 223 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 SUPT3HB4E1H0 165 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 NPIPB8E9PQR5 432 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 MATN2O00339 956 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 BTN3A3O00478 584 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 UBFD1O14562 309 aaKnown RBP5.27□□□□□ -1.57
ZEB1-220ENST00000560909 OR7A17O14581 309 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 FLRT2O43155 660 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 SHOX2O60902 331 aaPredicted RBP5.27□□□□□ -1.57
ZEB1-220ENST00000560909 SUPT3HO75486 399 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 SIX3O95343 332 aaPredicted RBP5.27□□□□□ -1.57
ZEB1-220ENST00000560909 MLYCDO95822 493 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 C9P02748 559 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 GP1BAP07359 652 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 CHRM5P08912 532 aaPredicted RBP5.27□□□□□ -1.57
ZEB1-220ENST00000560909 ALPPL2P10696 532 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 GFAPP14136 432 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 ACP1P24666 158 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 HRH2P25021 359 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 CD1CP29017 333 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 PEBP1P30086 187 aaKnown RBP5.27□□□□□ -1.57
ZEB1-220ENST00000560909 SOX18P35713 384 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 HSPA7P48741 367 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 NAGLUP54802 743 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 PKNOX1P55347 436 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 MAZP56270 477 aaKnown RBP5.27□□□□□ -1.57
ZEB1-220ENST00000560909 ABATP80404 500 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 NHLH1Q02575 133 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 CFHR1Q03591 330 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 CLCQ05315 142 aa5.27□□□□□ -1.57
ZEB1-220ENST00000560909 PRDX1Q06830 199 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms