RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 TMEM184CQ9NVA4 438 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 TRPC4Q9UBN4 977 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 CTSFQ9UBX1 484 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 PCYOX1Q9UHG3 505 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 C3orf18Q9UK00 162 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 HS3ST3B1Q9Y662 390 aa13.43□□□□□ -0.26
TPM1-223ENST00000560445 IGLV3-12A0A075B6K2 115 aa13.42□□□□□ -0.26
TPM1-223ENST00000560445 CCDC188H7C350 402 aa13.42□□□□□ -0.26
TPM1-223ENST00000560445 CNOT3O75175 753 aaKnown RBP13.42□□□□□ -0.26
TPM1-223ENST00000560445 CTSBP07858 339 aa13.42□□□□□ -0.26
TPM1-223ENST00000560445 ZGLP1P0C6A0 271 aa13.42□□□□□ -0.26
TPM1-223ENST00000560445 MYBL2P10244 700 aa13.42□□□□□ -0.26
TPM1-223ENST00000560445 GP1BBP13224 206 aa13.42□□□□□ -0.26
TPM1-223ENST00000560445 ICAM2P13598 275 aa13.42□□□□□ -0.26
TPM1-223ENST00000560445 PAFAH1B1P43034 410 aa13.42□□□□□ -0.26
TPM1-223ENST00000560445 AP1S2P56377 157 aa13.42□□□□□ -0.26
TPM1-223ENST00000560445 CUL1Q13616 776 aa13.42□□□□□ -0.26
TPM1-223ENST00000560445 B3GNTL1Q67FW5 361 aaPredicted RBP13.42□□□□□ -0.26
TPM1-223ENST00000560445 ZNF425Q6IV72 752 aa13.42□□□□□ -0.26
TPM1-223ENST00000560445 COX15Q7KZN9 410 aa13.42□□□□□ -0.26
TPM1-223ENST00000560445 KBTBD2Q8IY47 623 aa13.42□□□□□ -0.26
TPM1-223ENST00000560445 CPNE9Q8IYJ1 553 aa13.42□□□□□ -0.26
TPM1-223ENST00000560445 CERS2Q96G23 380 aa13.42□□□□□ -0.26
TPM1-223ENST00000560445 HAUS8Q9BT25 410 aa13.42□□□□□ -0.26
TPM1-223ENST00000560445 YIPF2Q9BWQ6 316 aa13.42□□□□□ -0.26
TPM1-223ENST00000560445 ZNF552Q9H707 407 aaPredicted RBP13.42□□□□□ -0.26
TPM1-223ENST00000560445 PARVBQ9HBI1 364 aa13.42□□□□□ -0.26
TPM1-223ENST00000560445 PPANQ9NQ55 473 aaKnown RBP13.42□□□□□ -0.26
TPM1-223ENST00000560445 RIC8BQ9NVN3 520 aa13.42□□□□□ -0.26
TPM1-223ENST00000560445 RNF14Q9UBS8 474 aa13.42□□□□□ -0.26
TPM1-223ENST00000560445 MAU2Q9Y6X3 613 aa13.42□□□□□ -0.26
TPM1-223ENST00000560445 CCDC88CQ9P219 2028 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 MAST4O15021 2626 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 SPTBN1Q01082 2364 aaKnown RBP13.41□□□□□ -0.26
TPM1-223ENST00000560445 LOC105369274A0A096LPK9 316 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 NSG1A0A0A6YYJ2 146 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 LOC102723532A0A0G2JNH3 316 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 H0YIG0 161 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 SOCS6O14544 535 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 DDAH2O95865 285 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 HEXBP07686 556 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 ENO2P09104 434 aaPredicted RBP13.41□□□□□ -0.26
TPM1-223ENST00000560445 EMP2P54851 167 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 ARL4CP56559 192 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 IL2P60568 153 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 DR1Q01658 176 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 KLC1Q07866 573 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 PDAP1Q13442 181 aaKnown RBP13.41□□□□□ -0.26
TPM1-223ENST00000560445 ESPL1Q14674 2120 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 TLR1Q15399 786 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 HIF1AQ16665 826 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 FBXO42Q6P3S6 717 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 ZNF549Q6P9A3 640 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 KIRREL2Q6UWL6 708 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 ISLR2Q6UXK2 745 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 RIPOR1Q6ZS17 1223 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 NDUFAF7Q7L592 441 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 C17orf64Q86WR6 236 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 CNTN4Q8IWV2 1026 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 OR4N4Q8N0Y3 316 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 METTL27Q8N6F8 245 aaPredicted RBP13.41□□□□□ -0.26
TPM1-223ENST00000560445 CAMKVQ8NCB2 501 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 BBOF1Q8ND07 529 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 OR11G2Q8NGC1 345 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 GIMAP7Q8NHV1 300 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 METTL21AQ8WXB1 218 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 MMABQ96EY8 250 aaPredicted RBP13.41□□□□□ -0.26
TPM1-223ENST00000560445 C10orf90Q96M02 699 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 OR2A5Q96R48 311 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 TGIF2Q9GZN2 237 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 NSMCE4AQ9NXX6 385 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 C19orf25Q9UFG5 118 aaPredicted RBP13.41□□□□□ -0.26
TPM1-223ENST00000560445 RUVBL1Q9Y265 456 aaKnown RBP13.41□□□□□ -0.26
TPM1-223ENST00000560445 COPG1Q9Y678 874 aaKnown RBP13.41□□□□□ -0.26
TPM1-223ENST00000560445 HEATR5BQ9P2D3 2071 aa13.41□□□□□ -0.26
TPM1-223ENST00000560445 PRRC2CQ9Y520 2896 aaKnown RBP13.4□□□□□ -0.26
TPM1-223ENST00000560445 KCNE1BA0A087WTH5 132 aa13.4□□□□□ -0.26
TPM1-223ENST00000560445 HAX1O00165 279 aa13.4□□□□□ -0.26
TPM1-223ENST00000560445 HAUS5O94927 633 aa13.4□□□□□ -0.26
TPM1-223ENST00000560445 SLC35G6P0C7Q6 338 aa13.4□□□□□ -0.26
TPM1-223ENST00000560445 GNLYP22749 145 aa13.4□□□□□ -0.26
TPM1-223ENST00000560445 IMPA1P29218 277 aa13.4□□□□□ -0.26
TPM1-223ENST00000560445 GNG11P61952 73 aa13.4□□□□□ -0.26
TPM1-223ENST00000560445 TBPL1P62380 186 aa13.4□□□□□ -0.26
TPM1-223ENST00000560445 MPP1Q00013 466 aa13.4□□□□□ -0.26
TPM1-223ENST00000560445 FRG1Q14331 258 aaKnown RBP13.4□□□□□ -0.26
TPM1-223ENST00000560445 BBS9Q3SYG4 887 aa13.4□□□□□ -0.26
TPM1-223ENST00000560445 CRB2Q5IJ48 1285 aa13.4□□□□□ -0.26
TPM1-223ENST00000560445 CAPN13Q6MZZ7 669 aaPredicted RBP13.4□□□□□ -0.26
TPM1-223ENST00000560445 FAM45BPQ6NSW5 357 aa13.4□□□□□ -0.26
TPM1-223ENST00000560445 Q6ZS92 163 aa13.4□□□□□ -0.26
TPM1-223ENST00000560445 PIWIL4Q7Z3Z4 852 aaKnown RBP13.4□□□□□ -0.26
TPM1-223ENST00000560445 Q8NA96 180 aa13.4□□□□□ -0.26
TPM1-223ENST00000560445 FAM45AQ8TCE6 357 aa13.4□□□□□ -0.26
TPM1-223ENST00000560445 LMF1Q96S06 567 aa13.4□□□□□ -0.26
TPM1-223ENST00000560445 TRIM56Q9BRZ2 755 aaKnown RBP13.4□□□□□ -0.26
TPM1-223ENST00000560445 DDX47Q9H0S4 455 aaKnown RBP13.4□□□□□ -0.26
TPM1-223ENST00000560445 ABCF3Q9NUQ8 709 aa13.4□□□□□ -0.26
TPM1-223ENST00000560445 GALPQ9UBC7 116 aa13.4□□□□□ -0.26
TPM1-223ENST00000560445 TEKT2Q9UIF3 430 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms