RNA–Protein interactions for RNA: ENST00000560314.1

LINC02253-202, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 5 BASIC

Gene LINC02253, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-202ENST00000560314 DRC3Q9H069 523 aa10.6□□□□□ -0.71
LINC02253-202ENST00000560314 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.6□□□□□ -0.71
LINC02253-202ENST00000560314 ZNF700Q9H0M5 742 aa10.6□□□□□ -0.71
LINC02253-202ENST00000560314 CHRAC1Q9NRG0 131 aa10.6□□□□□ -0.71
LINC02253-202ENST00000560314 FAM114A2Q9NRY5 505 aa10.6□□□□□ -0.71
LINC02253-202ENST00000560314 ZNF148Q9UQR1 794 aa10.6□□□□□ -0.71
LINC02253-202ENST00000560314 RUVBL1Q9Y265 456 aaKnown RBP10.6□□□□□ -0.71
LINC02253-202ENST00000560314 TRGV8A0A0C4DH27 118 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 OR5H15A6NDH6 313 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 UNC5CO95185 931 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 WDPCPO95876 746 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 ESR1P03372 595 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 CATP04040 527 aaKnown RBP10.59□□□□□ -0.71
LINC02253-202ENST00000560314 AGAP20933 346 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 RPA3P35244 121 aaPredicted RBP10.59□□□□□ -0.71
LINC02253-202ENST00000560314 RIPPLY3P57055 190 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 EEF1A2Q05639 463 aaKnown RBP10.59□□□□□ -0.71
LINC02253-202ENST00000560314 GTF3C1Q12789 2109 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 FAM53BQ14153 422 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 PCOLCEQ15113 449 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 NDUFA9Q16795 377 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 ZNF630Q2M218 657 aaPredicted RBP10.59□□□□□ -0.71
LINC02253-202ENST00000560314 TYSND1Q2T9J0 566 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 CCSMST1Q4G0I0 132 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.59□□□□□ -0.71
LINC02253-202ENST00000560314 CTSL3PQ5NE16 218 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 ZNF425Q6IV72 752 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 FBXO42Q6P3S6 717 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 TMEM205Q6UW68 189 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 MRGPRGQ86SM5 289 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 PAQR7Q86WK9 346 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 ARHGEF39Q8N4T4 335 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 OTUD6BQ8N6M0 293 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 OR9A1PQ8NGU1 263 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 MMABQ96EY8 250 aaPredicted RBP10.59□□□□□ -0.71
LINC02253-202ENST00000560314 BIRC8Q96P09 236 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 OR2A5Q96R48 311 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 TCF12Q99081 682 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 ACAT2Q9BWD1 397 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 PLA2G3Q9NZ20 509 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 BFARQ9NZS9 450 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 SEC14L3Q9UDX4 400 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 RUVBL2Q9Y230 463 aaKnown RBP10.59□□□□□ -0.71
LINC02253-202ENST00000560314 DRG1Q9Y295 367 aaKnown RBP10.59□□□□□ -0.71
LINC02253-202ENST00000560314 VPS9D1Q9Y2B5 631 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 PCDHGB6Q9Y5F9 930 aa10.59□□□□□ -0.71
LINC02253-202ENST00000560314 OTOGQ6ZRI0 2925 aa10.58□□□□□ -0.72
LINC02253-202ENST00000560314 IGKV1-8A0A0C4DH67 115 aa10.58□□□□□ -0.72
LINC02253-202ENST00000560314 KRT87PA6NCN2 255 aa10.58□□□□□ -0.72
LINC02253-202ENST00000560314 ARHGEF33A8MVX0 844 aa10.58□□□□□ -0.72
LINC02253-202ENST00000560314 CCL21O00585 134 aa10.58□□□□□ -0.72
LINC02253-202ENST00000560314 PRAMEF2O60811 474 aa10.58□□□□□ -0.72
LINC02253-202ENST00000560314 PSIP1O75475 530 aaKnown RBP10.58□□□□□ -0.72
LINC02253-202ENST00000560314 MLYCDO95822 493 aa10.58□□□□□ -0.72
LINC02253-202ENST00000560314 C8orf89P0DMQ9 161 aa10.58□□□□□ -0.72
LINC02253-202ENST00000560314 ITGAMP11215 1152 aa10.58□□□□□ -0.72
LINC02253-202ENST00000560314 HTR1EP28566 365 aa10.58□□□□□ -0.72
LINC02253-202ENST00000560314 SESN2P58004 480 aaPredicted RBP10.58□□□□□ -0.72
LINC02253-202ENST00000560314 ABATP80404 500 aa10.58□□□□□ -0.72
LINC02253-202ENST00000560314 PRDX1Q06830 199 aaKnown RBP10.58□□□□□ -0.72
LINC02253-202ENST00000560314 FASTKQ14296 549 aaKnown RBP10.58□□□□□ -0.72
LINC02253-202ENST00000560314 HKDC1Q2TB90 917 aa10.58□□□□□ -0.72
LINC02253-202ENST00000560314 LCE2DQ5TA82 110 aaPredicted RBP10.58□□□□□ -0.72
LINC02253-202ENST00000560314 ICE2Q659A1 982 aa10.58□□□□□ -0.72
LINC02253-202ENST00000560314 LRRC8BQ6P9F7 803 aa10.58□□□□□ -0.72
LINC02253-202ENST00000560314 XKRXQ6PP77 449 aa10.58□□□□□ -0.72
LINC02253-202ENST00000560314 NEK10Q6ZWH5 1172 aa10.58□□□□□ -0.72
LINC02253-202ENST00000560314 SDCCAG8Q86SQ7 713 aaPredicted RBP10.58□□□□□ -0.72
LINC02253-202ENST00000560314 ZC3H7AQ8IWR0 971 aaKnown RBP10.58□□□□□ -0.72
LINC02253-202ENST00000560314 METTL21AQ8WXB1 218 aa10.58□□□□□ -0.72
LINC02253-202ENST00000560314 LPGAT1Q92604 370 aa10.58□□□□□ -0.72
LINC02253-202ENST00000560314 KIFC1Q9BW19 673 aa10.58□□□□□ -0.72
LINC02253-202ENST00000560314 YIPF2Q9BWQ6 316 aa10.58□□□□□ -0.72
LINC02253-202ENST00000560314 C19orf25Q9UFG5 118 aaPredicted RBP10.58□□□□□ -0.72
LINC02253-202ENST00000560314 TAC3Q9UHF0 121 aa10.58□□□□□ -0.72
LINC02253-202ENST00000560314 E5RI56 91 aa10.57□□□□□ -0.72
LINC02253-202ENST00000560314 SLC19A2O60779 497 aa10.57□□□□□ -0.72
LINC02253-202ENST00000560314 COX6B1P14854 86 aa10.57□□□□□ -0.72
LINC02253-202ENST00000560314 POU3F2P20265 443 aaPredicted RBP10.57□□□□□ -0.72
LINC02253-202ENST00000560314 OGNP20774 298 aaKnown RBP10.57□□□□□ -0.72
LINC02253-202ENST00000560314 MST1P26927 711 aa10.57□□□□□ -0.72
LINC02253-202ENST00000560314 ARNTP27540 789 aa10.57□□□□□ -0.72
LINC02253-202ENST00000560314 GRNP28799 593 aaKnown RBP10.57□□□□□ -0.72
LINC02253-202ENST00000560314 AVPR1BP47901 424 aa10.57□□□□□ -0.72
LINC02253-202ENST00000560314 NPY2RP49146 381 aa10.57□□□□□ -0.72
LINC02253-202ENST00000560314 PNLIPRP1P54315 467 aa10.57□□□□□ -0.72
LINC02253-202ENST00000560314 BASP1P80723 227 aaKnown RBP10.57□□□□□ -0.72
LINC02253-202ENST00000560314 CDK16Q00536 496 aa10.57□□□□□ -0.72
LINC02253-202ENST00000560314 ZNF33BQ06732 778 aa10.57□□□□□ -0.72
LINC02253-202ENST00000560314 TTLL9Q3SXZ7 439 aa10.57□□□□□ -0.72
LINC02253-202ENST00000560314 PLAG1Q6DJT9 500 aa10.57□□□□□ -0.72
LINC02253-202ENST00000560314 FAAH2Q6GMR7 532 aa10.57□□□□□ -0.72
LINC02253-202ENST00000560314 DRICH1Q6PGQ1 229 aaPredicted RBP10.57□□□□□ -0.72
LINC02253-202ENST00000560314 SUSD1Q6UWL2 747 aa10.57□□□□□ -0.72
LINC02253-202ENST00000560314 SLC13A5Q86YT5 568 aaPredicted RBP10.57□□□□□ -0.72
LINC02253-202ENST00000560314 RNF10Q8N5U6 811 aaKnown RBP10.57□□□□□ -0.72
LINC02253-202ENST00000560314 FBXO15Q8NCQ5 510 aaPredicted RBP10.57□□□□□ -0.72
LINC02253-202ENST00000560314 THAP3Q8WTV1 239 aaPredicted RBP10.57□□□□□ -0.72
LINC02253-202ENST00000560314 IMMP1LQ96LU5 166 aa10.57□□□□□ -0.72
LINC02253-202ENST00000560314 EBNA1BP2Q99848 306 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms