RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 CSNK1G2P78368 415 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 CDKL1Q00532 357 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 SLC7A5Q01650 507 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 FAM69BQ5VUD6 431 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 GARNL3Q5VVW2 1013 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 MLIPQ5VWP3 458 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 PRMT9Q6P2P2 845 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 MBOAT1Q6ZNC8 495 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 MED25Q71SY5 747 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 ZNF605Q86T29 641 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 TTC29Q8NA56 475 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-213ENST00000560175 ABHD11Q8NFV4 315 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 ANKRD49Q8WVL7 239 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 CDKL2Q92772 493 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 TM4SF19Q96DZ7 209 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 THAP11Q96EK4 314 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 HIST1H2AHQ96KK5 128 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 UBXN10Q96LJ8 280 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 C10orf90Q96M02 699 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 RBBP8Q99708 897 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 HIST1H2AJQ99878 128 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 H2AFJQ9BTM1 129 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 TRIM54Q9BYV2 358 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 TRIM55Q9BYV6 548 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 FAM129AQ9BZQ8 928 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 MAN2B2Q9Y2E5 1009 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 MTO1Q9Y2Z2 717 aaKnown RBP12.61□□□□□ -0.39
SMAD3-213ENST00000560175 PCDHGA9Q9Y5G4 932 aaKnown RBP12.61□□□□□ -0.39
SMAD3-213ENST00000560175 DOCK10Q96BY6 2186 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 H7BY64 318 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 TXNDC9O14530 226 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 RFPL1O75677 317 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 GP5P40197 560 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 CSRP3P50461 194 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 SOX8P57073 446 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 NAE1Q13564 534 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 FAM53BQ14153 422 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 ZKSCAN8Q15776 578 aaPredicted RBP12.6□□□□□ -0.39
SMAD3-213ENST00000560175 NKG7Q16617 165 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 MUM1Q2TAK8 710 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 GLE1Q53GS7 698 aaKnown RBP12.6□□□□□ -0.39
SMAD3-213ENST00000560175 GRTP1Q5TC63 336 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 PRAMEF13Q5VWM6 474 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 C8orf74Q6P047 294 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 TMEM151BQ8IW70 566 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 KLHDC8AQ8IYD2 350 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 TMEM102Q8N9M5 508 aaPredicted RBP12.6□□□□□ -0.39
SMAD3-213ENST00000560175 NOA1Q8NC60 698 aaKnown RBP12.6□□□□□ -0.39
SMAD3-213ENST00000560175 ATL1Q8WXF7 558 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 PRAP1Q96NZ9 151 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 OR4K3Q96R72 315 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 SPSB2Q99619 263 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 HAUS8Q9BT25 410 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 FUT8Q9BYC5 575 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 DERL2Q9GZP9 239 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 ATG10Q9H0Y0 220 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 ING2Q9H160 280 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 ARL15Q9NXU5 204 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 DMGDHQ9UI17 866 aaKnown RBP12.6□□□□□ -0.39
SMAD3-213ENST00000560175 TLK1Q9UKI8 766 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 SH2B3Q9UQQ2 575 aa12.6□□□□□ -0.39
SMAD3-213ENST00000560175 RUVBL1Q9Y265 456 aaKnown RBP12.6□□□□□ -0.39
SMAD3-213ENST00000560175 ESYT3A0FGR9 886 aa12.59□□□□□ -0.39
SMAD3-213ENST00000560175 CDC7O00311 574 aa12.59□□□□□ -0.39
SMAD3-213ENST00000560175 HAT1O14929 419 aa12.59□□□□□ -0.39
SMAD3-213ENST00000560175 FOXS1O43638 330 aa12.59□□□□□ -0.39
SMAD3-213ENST00000560175 PLA2G2AP14555 144 aa12.59□□□□□ -0.39
SMAD3-213ENST00000560175 SLC26A3P40879 764 aa12.59□□□□□ -0.39
SMAD3-213ENST00000560175 RPS15AP62244 130 aaKnown RBP12.59□□□□□ -0.39
SMAD3-213ENST00000560175 NFATC3Q12968 1075 aa12.59□□□□□ -0.39
SMAD3-213ENST00000560175 NAB1Q13506 487 aa12.59□□□□□ -0.39
SMAD3-213ENST00000560175 ZNF460Q14592 562 aa12.59□□□□□ -0.39
SMAD3-213ENST00000560175 KBTBD12Q3ZCT8 623 aa12.59□□□□□ -0.39
SMAD3-213ENST00000560175 CDKL4Q5MAI5 379 aa12.59□□□□□ -0.39
SMAD3-213ENST00000560175 CAPN13Q6MZZ7 669 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-213ENST00000560175 VN1R4Q7Z5H5 301 aa12.59□□□□□ -0.39
SMAD3-213ENST00000560175 C17orf64Q86WR6 236 aa12.59□□□□□ -0.39
SMAD3-213ENST00000560175 RAB43Q86YS6 212 aa12.59□□□□□ -0.39
SMAD3-213ENST00000560175 C9orf43Q8TAL5 461 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-213ENST00000560175 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-213ENST00000560175 ZNF304Q9HCX3 659 aa12.59□□□□□ -0.39
SMAD3-213ENST00000560175 IRAK4Q9NWZ3 460 aa12.59□□□□□ -0.39
SMAD3-213ENST00000560175 NDOR1Q9UHB4 597 aa12.59□□□□□ -0.39
SMAD3-213ENST00000560175 GPN3Q9UHW5 284 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-213ENST00000560175 PTRH2Q9Y3E5 179 aaKnown RBP12.59□□□□□ -0.39
SMAD3-213ENST00000560175 OARD1Q9Y530 152 aa12.59□□□□□ -0.39
SMAD3-213ENST00000560175 PCDHGB7Q9Y5F8 929 aa12.59□□□□□ -0.39
SMAD3-213ENST00000560175 TNRC6AQ8NDV7 1962 aaKnown RBP12.59□□□□□ -0.39
SMAD3-213ENST00000560175 MKRN2OSH3BPM6 223 aa12.58□□□□□ -0.4
SMAD3-213ENST00000560175 K7EM74 188 aa12.58□□□□□ -0.4
SMAD3-213ENST00000560175 LCMT2O60294 686 aaKnown RBP12.58□□□□□ -0.4
SMAD3-213ENST00000560175 MMP11P24347 488 aa12.58□□□□□ -0.4
SMAD3-213ENST00000560175 ECHS1P30084 290 aa12.58□□□□□ -0.4
SMAD3-213ENST00000560175 SPRP35270 261 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-213ENST00000560175 GGT5P36269 586 aa12.58□□□□□ -0.4
SMAD3-213ENST00000560175 FOLR3P41439 243 aa12.58□□□□□ -0.4
SMAD3-213ENST00000560175 OR1D4P47884 311 aa12.58□□□□□ -0.4
SMAD3-213ENST00000560175 HNMTP50135 292 aa12.58□□□□□ -0.4
SMAD3-213ENST00000560175 TSTA3Q13630 321 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-213ENST00000560175 SLC9A5Q14940 896 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms