RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 TDGF1P3P51864 188 aa8.71□□□□□ -1.02
HDDC3-204ENST00000559834 ADARP55265 1226 aaKnown RBP8.71□□□□□ -1.02
HDDC3-204ENST00000559834 ABATP80404 500 aa8.71□□□□□ -1.02
HDDC3-204ENST00000559834 CDK16Q00536 496 aa8.71□□□□□ -1.02
HDDC3-204ENST00000559834 EEF1A2Q05639 463 aaKnown RBP8.71□□□□□ -1.02
HDDC3-204ENST00000559834 TSTA3Q13630 321 aaPredicted RBP8.71□□□□□ -1.02
HDDC3-204ENST00000559834 FAM53BQ14153 422 aa8.71□□□□□ -1.02
HDDC3-204ENST00000559834 CCNG2Q16589 344 aa8.71□□□□□ -1.02
HDDC3-204ENST00000559834 ZXDCQ2QGD7 858 aaPredicted RBP8.71□□□□□ -1.02
HDDC3-204ENST00000559834 FAAH2Q6GMR7 532 aa8.71□□□□□ -1.02
HDDC3-204ENST00000559834 XKRXQ6PP77 449 aa8.71□□□□□ -1.02
HDDC3-204ENST00000559834 SUSD1Q6UWL2 747 aa8.71□□□□□ -1.02
HDDC3-204ENST00000559834 RPTNQ6XPR3 784 aa8.71□□□□□ -1.02
HDDC3-204ENST00000559834 MRGPRGQ86SM5 289 aa8.71□□□□□ -1.02
HDDC3-204ENST00000559834 PAQR7Q86WK9 346 aa8.71□□□□□ -1.02
HDDC3-204ENST00000559834 SLC13A5Q86YT5 568 aaPredicted RBP8.71□□□□□ -1.02
HDDC3-204ENST00000559834 ZNF808Q8N4W9 903 aaPredicted RBP8.71□□□□□ -1.02
HDDC3-204ENST00000559834 MCOLN3Q8TDD5 553 aa8.71□□□□□ -1.02
HDDC3-204ENST00000559834 BIRC8Q96P09 236 aa8.71□□□□□ -1.02
HDDC3-204ENST00000559834 OR2A5Q96R48 311 aa8.71□□□□□ -1.02
HDDC3-204ENST00000559834 MESP1Q9BRJ9 268 aa8.71□□□□□ -1.02
HDDC3-204ENST00000559834 KIFC1Q9BW19 673 aa8.71□□□□□ -1.02
HDDC3-204ENST00000559834 DRC3Q9H069 523 aa8.71□□□□□ -1.02
HDDC3-204ENST00000559834 ZNF700Q9H0M5 742 aa8.71□□□□□ -1.02
HDDC3-204ENST00000559834 MKL2Q9ULH7 1088 aa8.71□□□□□ -1.02
HDDC3-204ENST00000559834 RUVBL2Q9Y230 463 aaKnown RBP8.71□□□□□ -1.02
HDDC3-204ENST00000559834 RUVBL1Q9Y265 456 aaKnown RBP8.71□□□□□ -1.02
HDDC3-204ENST00000559834 VPS9D1Q9Y2B5 631 aa8.71□□□□□ -1.02
HDDC3-204ENST00000559834 NUP210LQ5VU65 1888 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 A0A0A6YYC8 382 aaPredicted RBP8.7□□□□□ -1.02
HDDC3-204ENST00000559834 OR5H15A6NDH6 313 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 A8MUI8 341 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 I3L1I5 382 aaPredicted RBP8.7□□□□□ -1.02
HDDC3-204ENST00000559834 MYO1CO00159 1063 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 NRP2O60462 931 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 PSIP1O75475 530 aaKnown RBP8.7□□□□□ -1.02
HDDC3-204ENST00000559834 CYC1P08574 325 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 ZSCAN5DPP0CG00 497 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 C8orf89P0DMQ9 161 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 ITGAMP11215 1152 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 ERGP11308 486 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 ESRRAP11474 423 aaPredicted RBP8.7□□□□□ -1.02
HDDC3-204ENST00000559834 EZRP15311 586 aaKnown RBP8.7□□□□□ -1.02
HDDC3-204ENST00000559834 PAMP19021 973 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 HRH2P25021 359 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 HTR1EP28566 365 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 CA7P43166 264 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 PNLIPRP1P54315 467 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 YBX1P67809 324 aaKnown RBP8.7□□□□□ -1.02
HDDC3-204ENST00000559834 CRADDP78560 199 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 BASP1P80723 227 aaKnown RBP8.7□□□□□ -1.02
HDDC3-204ENST00000559834 SARNPP82979 210 aaKnown RBP8.7□□□□□ -1.02
HDDC3-204ENST00000559834 KLHL38Q2WGJ6 581 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 TTLL9Q3SXZ7 439 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 CTSL3PQ5NE16 218 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 ARMC3Q5W041 872 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 ICE2Q659A1 982 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 ZNF425Q6IV72 752 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 HIBCHQ6NVY1 386 aaPredicted RBP8.7□□□□□ -1.02
HDDC3-204ENST00000559834 TMEM205Q6UW68 189 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 BNC2Q6ZN30 1099 aaPredicted RBP8.7□□□□□ -1.02
HDDC3-204ENST00000559834 GSTA5Q7RTV2 222 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 GDF7Q7Z4P5 450 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 ADCK2Q7Z695 626 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 PRUNE1Q86TP1 453 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 AMER3Q8N944 861 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 ITLN2Q8WWU7 325 aaPredicted RBP8.7□□□□□ -1.02
HDDC3-204ENST00000559834 LPGAT1Q92604 370 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 MFSD3Q96ES6 412 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 IMMP1LQ96LU5 166 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 ZNF354BQ96LW1 612 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 C19orf25Q9UFG5 118 aaPredicted RBP8.7□□□□□ -1.02
HDDC3-204ENST00000559834 TAC3Q9UHF0 121 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 PCYOX1Q9UHG3 505 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 CRYL1Q9Y2S2 319 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 ITPR2Q14571 2701 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 CROCCQ5TZA2 2017 aa8.7□□□□□ -1.02
HDDC3-204ENST00000559834 KRT87PA6NCN2 255 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 ARHGEF33A8MVX0 844 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 H0YIG0 161 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 FFAR3O14843 346 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 GPR42O15529 346 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 TTI1O43156 1089 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 FOXS1O43638 330 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 ZBTB14O43829 449 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 NIPSNAP2O75323 286 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 F10P00742 488 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 COX6B1P14854 86 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 OGNP20774 298 aaKnown RBP8.69□□□□□ -1.02
HDDC3-204ENST00000559834 MGAT1P26572 445 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 MST1P26927 711 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 SMSP52788 366 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 ZNF33BQ06732 778 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 GBX1Q14549 363 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 PCOLCEQ15113 449 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 RPS6KA1Q15418 735 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 ZNF630Q2M218 657 aaPredicted RBP8.69□□□□□ -1.02
HDDC3-204ENST00000559834 TYSND1Q2T9J0 566 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 HKDC1Q2TB90 917 aa8.69□□□□□ -1.02
HDDC3-204ENST00000559834 KRTCAP3Q53RY4 240 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms