RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 CXCR2P25025 360 aa12.44□□□□□ -0.42
TPM1-220ENST00000559556 NPY2RP49146 381 aa12.44□□□□□ -0.42
TPM1-220ENST00000559556 EMP2P54851 167 aa12.44□□□□□ -0.42
TPM1-220ENST00000559556 EEF1A2Q05639 463 aaKnown RBP12.44□□□□□ -0.42
TPM1-220ENST00000559556 SIX1Q15475 284 aaPredicted RBP12.44□□□□□ -0.42
TPM1-220ENST00000559556 HKDC1Q2TB90 917 aa12.44□□□□□ -0.42
TPM1-220ENST00000559556 ANKRD20A4Q4UJ75 823 aa12.44□□□□□ -0.42
TPM1-220ENST00000559556 ZNF425Q6IV72 752 aa12.44□□□□□ -0.42
TPM1-220ENST00000559556 MRNIPQ6NTE8 343 aa12.44□□□□□ -0.42
TPM1-220ENST00000559556 SUSD1Q6UWL2 747 aa12.44□□□□□ -0.42
TPM1-220ENST00000559556 C4orf22Q6V702 233 aa12.44□□□□□ -0.42
TPM1-220ENST00000559556 SRRM1Q8IYB3 904 aaKnown RBP12.44□□□□□ -0.42
TPM1-220ENST00000559556 CSNK1A1LQ8N752 337 aa12.44□□□□□ -0.42
TPM1-220ENST00000559556 SMPDL3AQ92484 453 aa12.44□□□□□ -0.42
TPM1-220ENST00000559556 MAGEB10Q96LZ2 347 aaPredicted RBP12.44□□□□□ -0.42
TPM1-220ENST00000559556 TCF12Q99081 682 aa12.44□□□□□ -0.42
TPM1-220ENST00000559556 KIFC1Q9BW19 673 aa12.44□□□□□ -0.42
TPM1-220ENST00000559556 ZNF700Q9H0M5 742 aa12.44□□□□□ -0.42
TPM1-220ENST00000559556 SYBUQ9NX95 663 aa12.44□□□□□ -0.42
TPM1-220ENST00000559556 HRNRQ86YZ3 2850 aaPredicted RBP12.43□□□□□ -0.42
TPM1-220ENST00000559556 ARHGAP10A1A4S6 786 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 PRSS44E7EML9 344 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 FFAR3O14843 346 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 GPR42O15529 346 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 VAPBO95292 243 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 CELA2AP08217 269 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 ITGAMP11215 1152 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 PKMP14618 531 aaKnown RBP12.43□□□□□ -0.42
TPM1-220ENST00000559556 OGNP20774 298 aaKnown RBP12.43□□□□□ -0.42
TPM1-220ENST00000559556 RPA3P35244 121 aaPredicted RBP12.43□□□□□ -0.42
TPM1-220ENST00000559556 EFNA3P52797 238 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 KCNK10P57789 538 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 AP2B1P63010 937 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 BASP1P80723 227 aaKnown RBP12.43□□□□□ -0.42
TPM1-220ENST00000559556 CDK16Q00536 496 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 RELAQ04206 551 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 ART3Q13508 389 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 PCOLCEQ15113 449 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 ICE2Q659A1 982 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 DRICH1Q6PGQ1 229 aaPredicted RBP12.43□□□□□ -0.42
TPM1-220ENST00000559556 TMEM205Q6UW68 189 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 SDCCAG8Q86SQ7 713 aaPredicted RBP12.43□□□□□ -0.42
TPM1-220ENST00000559556 ZC3H7AQ8IWR0 971 aaKnown RBP12.43□□□□□ -0.42
TPM1-220ENST00000559556 OTUD6BQ8N6M0 293 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 MFSD3Q96ES6 412 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 MMABQ96EY8 250 aaPredicted RBP12.43□□□□□ -0.42
TPM1-220ENST00000559556 OR2A5Q96R48 311 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 UNKQ9C0B0 810 aaKnown RBP12.43□□□□□ -0.42
TPM1-220ENST00000559556 DRC3Q9H069 523 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 FAM114A2Q9NRY5 505 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 PLA2G3Q9NZ20 509 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 BFARQ9NZS9 450 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 ABI3Q9P2A4 366 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 COPG2Q9UBF2 871 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 TSR3Q9UJK0 312 aaKnown RBP12.43□□□□□ -0.42
TPM1-220ENST00000559556 SOX13Q9UN79 622 aa12.43□□□□□ -0.42
TPM1-220ENST00000559556 KLF2Q9Y5W3 355 aaPredicted RBP12.43□□□□□ -0.42
TPM1-220ENST00000559556 NIPBLQ6KC79 2804 aaeCLIP12.43□□□□□ -0.42
TPM1-220ENST00000559556 TXNDC9O14530 226 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 PFDN6O15212 129 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 P2RX6O15547 441 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 FOXS1O43638 330 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 CCNDBP1O95273 360 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 CATP04040 527 aaKnown RBP12.42□□□□□ -0.42
TPM1-220ENST00000559556 HEXBP07686 556 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 ANXA5P08758 320 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 TPSB2P20231 275 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 ELAVL4P26378 380 aaKnown RBP12.42□□□□□ -0.42
TPM1-220ENST00000559556 MGAT1P26572 445 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 FMO4P31512 558 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 HSD17B2P37059 387 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 PNLIPRP1P54315 467 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 PRDX1Q06830 199 aaKnown RBP12.42□□□□□ -0.42
TPM1-220ENST00000559556 FAM53BQ14153 422 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 NAA30Q147X3 362 aaPredicted RBP12.42□□□□□ -0.42
TPM1-220ENST00000559556 TPSAB1Q15661 275 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 CCNG2Q16589 344 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 KLHL38Q2WGJ6 581 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 ACSBG2Q5FVE4 666 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 ARMC3Q5W041 872 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 SP5Q6BEB4 398 aaPredicted RBP12.42□□□□□ -0.42
TPM1-220ENST00000559556 FAAH2Q6GMR7 532 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 KIAA0930Q6ICG6 404 aaPredicted RBP12.42□□□□□ -0.42
TPM1-220ENST00000559556 HIBCHQ6NVY1 386 aaPredicted RBP12.42□□□□□ -0.42
TPM1-220ENST00000559556 LRRC8BQ6P9F7 803 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 GFRALQ6UXV0 394 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 NEK10Q6ZWH5 1172 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 CILP2Q8IUL8 1156 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 FBXO15Q8NCQ5 510 aaPredicted RBP12.42□□□□□ -0.42
TPM1-220ENST00000559556 DNAJB8Q8NHS0 232 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 ITLN2Q8WWU7 325 aaPredicted RBP12.42□□□□□ -0.42
TPM1-220ENST00000559556 RERGQ96A58 199 aaPredicted RBP12.42□□□□□ -0.42
TPM1-220ENST00000559556 FAM136AQ96C01 138 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 UTP6Q9NYH9 597 aaKnown RBP12.42□□□□□ -0.42
TPM1-220ENST00000559556 GALPQ9UBC7 116 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 TAC3Q9UHF0 121 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 DRG1Q9Y295 367 aaKnown RBP12.42□□□□□ -0.42
TPM1-220ENST00000559556 ZKSCAN5Q9Y2L8 839 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 CRYL1Q9Y2S2 319 aa12.42□□□□□ -0.42
TPM1-220ENST00000559556 NCKAP5O14513 1909 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms