RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 CCDC88CQ9P219 2028 aa10.95□□□□□ -0.66
SNX1-204ENST00000559061 ANKRD11Q6UB99 2663 aaPredicted RBP10.95□□□□□ -0.66
SNX1-204ENST00000559061 PKD1L2Q7Z442 2459 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 PTPRQQ9UMZ3 2332 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 A0A0J9YVX5 310 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 LOC101059948A0A1B0GTJ6 334 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 FEZF1A0PJY2 475 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 E7EQ34 232 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 H0YGG7 62 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 MAP2K7O14733 419 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 ZNF749O43361 778 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 RAD1O60671 282 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 SCRG1O75711 98 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 KRT37O76014 449 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 TBX6O95947 436 aaPredicted RBP10.94□□□□□ -0.66
SNX1-204ENST00000559061 CAPN1P07384 714 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 LIPCP11150 499 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 PYGBP11216 843 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 VARSP26640 1264 aaKnown RBP10.94□□□□□ -0.66
SNX1-204ENST00000559061 CD82P27701 267 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 ARL4DP49703 201 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 HNMTP50135 292 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 ITGA1P56199 1179 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 ARF3P61204 181 aaPredicted RBP10.94□□□□□ -0.66
SNX1-204ENST00000559061 ABATP80404 500 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 REEP5Q00765 189 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 TLE3Q04726 772 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 E2F2Q14209 437 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 SETDB1Q15047 1291 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 BEND6Q5SZJ8 279 aaPredicted RBP10.94□□□□□ -0.66
SNX1-204ENST00000559061 SULT1C3Q6IMI6 304 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 ADNP2Q6IQ32 1131 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 C16orf46Q6P387 395 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 SLCO4C1Q6ZQN7 724 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 FRA10AC1Q70Z53 315 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 TAOK1Q7L7X3 1001 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 IQCKQ8N0W5 287 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 STAG3L4Q8TBR4 150 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 ZBTB9Q96C00 473 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 EGFL8Q99944 293 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 ZPBPQ9BS86 351 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 TMEM109Q9BVC6 243 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 TRIM54Q9BYV2 358 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 ASPSCR1Q9BZE9 553 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 ULBP3Q9BZM4 244 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 SLC22A11Q9NSA0 550 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 TLK1Q9UKI8 766 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 PLCL2Q9UPR0 1127 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 PLAAQ9Y263 795 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 MRPS2Q9Y399 296 aaKnown RBP10.94□□□□□ -0.66
SNX1-204ENST00000559061 PCDHB3Q9Y5E6 796 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 IKBKGQ9Y6K9 419 aa10.94□□□□□ -0.66
SNX1-204ENST00000559061 IQANK1A0A1B0GTG1 560 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 A0A1B0GTL3 188 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 SUPT3HB4E1H0 165 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 C4orf51C9J302 202 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 STMND1H3BQB6 276 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 ZSCAN9O15535 394 aaPredicted RBP10.93□□□□□ -0.66
SNX1-204ENST00000559061 CNOT3O75175 753 aaKnown RBP10.93□□□□□ -0.66
SNX1-204ENST00000559061 SUPT3HO75486 399 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 OR2B3O76000 313 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 WDR47O94967 919 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 CCNDBP1O95273 360 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 SIX3O95343 332 aaPredicted RBP10.93□□□□□ -0.66
SNX1-204ENST00000559061 COL6A2P12110 1019 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 EZRP15311 586 aaKnown RBP10.93□□□□□ -0.66
SNX1-204ENST00000559061 CREB1P16220 341 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 CCND1P24385 295 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 STAT5AP42229 794 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 FOXL2P58012 376 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 VSX2P58304 361 aaPredicted RBP10.93□□□□□ -0.66
SNX1-204ENST00000559061 NFKB2Q00653 900 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 RELAQ04206 551 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 MAP7Q14244 749 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 ST3GAL2Q16842 350 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 FAM83EQ2M2I3 478 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 HKDC1Q2TB90 917 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 TNFAIP8L3Q5GJ75 292 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 TMTC4Q5T4D3 741 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 THEMIS2Q5TEJ8 643 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 FAM199XQ6PEV8 388 aaPredicted RBP10.93□□□□□ -0.66
SNX1-204ENST00000559061 FAM198BQ6UWH4 519 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 COX15Q7KZN9 410 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 VN1R5Q7Z5H4 357 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 TRABD2AQ86V40 505 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 BPHLQ86WA6 291 aaPredicted RBP10.93□□□□□ -0.66
SNX1-204ENST00000559061 DSELQ8IZU8 1212 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 ZNF655Q8N720 491 aaPredicted RBP10.93□□□□□ -0.66
SNX1-204ENST00000559061 ANKRD53Q8N9V6 530 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 ZNF248Q8NDW4 579 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 OR8K5Q8NH50 307 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 KCNE4Q8WWG9 221 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 SLC5A11Q8WWX8 675 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 ATL1Q8WXF7 558 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 TM4SF19Q96DZ7 209 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 MOCOSQ96EN8 888 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 DCBLD2Q96PD2 775 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 GBP5Q96PP8 586 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 ZFYVE21Q9BQ24 234 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 MACROD1Q9BQ69 325 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms