RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 GOLGA6L10A6NI86 522 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 CDRT15L2A8MXV6 281 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 STX16-NPEPL1H3BU86 382 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 K7EPI3 171 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 STX16O14662 325 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 PLIN3O60664 434 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 DXOO77932 396 aaKnown RBP16.72■□□□□ 0.27
TPM1-214ENST00000558544 TIAF1O95411 115 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 MSL3P1P0C860 447 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 FGF5P12034 268 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 EZRP15311 586 aaKnown RBP16.72■□□□□ 0.27
TPM1-214ENST00000558544 HRH2P25021 359 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 EEF1DP29692 281 aaKnown RBP16.72■□□□□ 0.27
TPM1-214ENST00000558544 CCR8P51685 355 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 MEF2AQ02078 507 aaPredicted RBP16.72■□□□□ 0.27
TPM1-214ENST00000558544 PCBP2Q15366 365 aaKnown RBP eCLIP16.72■□□□□ 0.27
TPM1-214ENST00000558544 TNFAIP8L3Q5GJ75 292 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 ZC3H12BQ5HYM0 836 aaKnown RBP16.72■□□□□ 0.27
TPM1-214ENST00000558544 TMEM164Q5U3C3 297 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 FRMPD2BQ6IN97 320 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 EXOC3L1Q86VI1 746 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 MCATQ8IVS2 390 aaKnown RBP16.72■□□□□ 0.27
TPM1-214ENST00000558544 CCDC63Q8NA47 563 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 ZFYVE21Q9BQ24 234 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 TMEM121BQ9BXQ6 578 aaPredicted RBP16.72■□□□□ 0.27
TPM1-214ENST00000558544 ASPSCR1Q9BZE9 553 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 SPNS1Q9H2V7 528 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 PELI2Q9HAT8 420 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 IRAK4Q9NWZ3 460 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 GPRC5BQ9NZH0 403 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 PILRAQ9UKJ1 303 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 PCDHGA3Q9Y5H0 932 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 FER1L5A0AVI2 2057 aa16.72■□□□□ 0.27
TPM1-214ENST00000558544 FEZF1A0PJY2 475 aa16.71■□□□□ 0.27
TPM1-214ENST00000558544 DLX3O60479 287 aa16.71■□□□□ 0.27
TPM1-214ENST00000558544 GNAZP19086 355 aa16.71■□□□□ 0.27
TPM1-214ENST00000558544 EPORP19235 508 aa16.71■□□□□ 0.27
TPM1-214ENST00000558544 VARSP26640 1264 aaKnown RBP16.71■□□□□ 0.27
TPM1-214ENST00000558544 SLC5A2P31639 672 aa16.71■□□□□ 0.27
TPM1-214ENST00000558544 ITGA1P56199 1179 aa16.71■□□□□ 0.27
TPM1-214ENST00000558544 NFKB2Q00653 900 aa16.71■□□□□ 0.27
TPM1-214ENST00000558544 FBXO42Q6P3S6 717 aa16.71■□□□□ 0.27
TPM1-214ENST00000558544 NXPE4Q6UWF7 544 aa16.71■□□□□ 0.27
TPM1-214ENST00000558544 TEX9Q8N6V9 391 aa16.71■□□□□ 0.27
TPM1-214ENST00000558544 ABHD11Q8NFV4 315 aa16.71■□□□□ 0.27
TPM1-214ENST00000558544 TEFMQ96QE5 360 aaKnown RBP16.71■□□□□ 0.27
TPM1-214ENST00000558544 SELENOSQ9BQE4 189 aa16.71■□□□□ 0.27
TPM1-214ENST00000558544 SYNPO2LQ9H987 977 aa16.71■□□□□ 0.27
TPM1-214ENST00000558544 TMBIM4Q9HC24 238 aa16.71■□□□□ 0.27
TPM1-214ENST00000558544 THSD1Q9NS62 852 aa16.71■□□□□ 0.27
TPM1-214ENST00000558544 PLLPQ9Y342 182 aa16.71■□□□□ 0.27
TPM1-214ENST00000558544 ANGPTL3Q9Y5C1 460 aa16.71■□□□□ 0.27
TPM1-214ENST00000558544 PCDHGA7Q9Y5G6 932 aa16.71■□□□□ 0.27
TPM1-214ENST00000558544 TNPO3Q9Y5L0 923 aaKnown RBP16.71■□□□□ 0.27
TPM1-214ENST00000558544 LOC105369274A0A096LPK9 316 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 LOC102723532A0A0G2JNH3 316 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 G3V2L1 256 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 AGPSO00116 658 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 E2F3O00716 465 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 CLGNO14967 610 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 NVLO15381 856 aaKnown RBP16.7■□□□□ 0.26
TPM1-214ENST00000558544 MYL2P10916 166 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 EPB42P16452 691 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 ZNF28P17035 718 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 ATP5F1P24539 256 aaPredicted RBP16.7■□□□□ 0.26
TPM1-214ENST00000558544 GRK3P35626 688 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 VSX2P58304 361 aaPredicted RBP16.7■□□□□ 0.26
TPM1-214ENST00000558544 GTF2H2Q13888 395 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 COL9A2Q14055 689 aaPredicted RBP16.7■□□□□ 0.26
TPM1-214ENST00000558544 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.7■□□□□ 0.26
TPM1-214ENST00000558544 PRAMEF17Q5VTA0 474 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 PWWP2BQ6NUJ5 590 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 GTF2H2CQ6P1K8 395 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 ZYG11AQ6WRX3 759 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 SLCO4C1Q6ZQN7 724 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 GOLGA7Q7Z5G4 137 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 TMEM126BQ8IUX1 230 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 OR4N4Q8N0Y3 316 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 ARMC2Q8NEN0 867 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 OR4K1Q8NGD4 311 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 OR8K5Q8NH50 307 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 TCP10LQ8TDR4 215 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 ZNF578Q96N58 590 aaPredicted RBP16.7■□□□□ 0.26
TPM1-214ENST00000558544 FAM111AQ96PZ2 611 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 ZPBPQ9BS86 351 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 CAPS2Q9BXY5 557 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 SPRTNQ9H040 489 aaPredicted RBP16.7■□□□□ 0.26
TPM1-214ENST00000558544 STMN4Q9H169 189 aaPredicted RBP16.7■□□□□ 0.26
TPM1-214ENST00000558544 STARD5Q9NSY2 213 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 SLC17A7Q9P2U7 560 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 SERTAD3Q9UJW9 196 aa16.7■□□□□ 0.26
TPM1-214ENST00000558544 C1QTNF9BB2RNN3 333 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 H3BMH7 237 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 TYROBPO43914 113 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 PRAMEF4O60810 478 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 SCRG1O75711 98 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 SASH3O75995 380 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 OR2B3O76000 313 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 EIF2S1P05198 315 aaKnown RBP16.69■□□□□ 0.26
TPM1-214ENST00000558544 RPS17P08708 135 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms