RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ALDH18A1P54886 795 aaKnown RBP24.47■■□□□ 1.51
SMAD6-202ENST00000557916 RELAQ04206 551 aa24.47■■□□□ 1.51
SMAD6-202ENST00000557916 CDC16Q13042 620 aa24.47■■□□□ 1.51
SMAD6-202ENST00000557916 SETDB1Q15047 1291 aa24.47■■□□□ 1.51
SMAD6-202ENST00000557916 PRAMEF17Q5VTA0 474 aa24.47■■□□□ 1.51
SMAD6-202ENST00000557916 C16orf46Q6P387 395 aa24.47■■□□□ 1.51
SMAD6-202ENST00000557916 PROSER1Q86XN7 944 aa24.47■■□□□ 1.51
SMAD6-202ENST00000557916 PLD3Q8IV08 490 aa24.47■■□□□ 1.51
SMAD6-202ENST00000557916 ZNF248Q8NDW4 579 aa24.47■■□□□ 1.51
SMAD6-202ENST00000557916 ABHD11Q8NFV4 315 aa24.47■■□□□ 1.51
SMAD6-202ENST00000557916 UBTD2Q8WUN7 234 aa24.47■■□□□ 1.51
SMAD6-202ENST00000557916 CNTNAP3BQ96NU0 1288 aa24.47■■□□□ 1.51
SMAD6-202ENST00000557916 ZIM3Q96PE6 472 aa24.47■■□□□ 1.51
SMAD6-202ENST00000557916 CNTNAP3Q9BZ76 1288 aa24.47■■□□□ 1.51
SMAD6-202ENST00000557916 TMCO1Q9UM00 188 aa24.47■■□□□ 1.51
SMAD6-202ENST00000557916 ASB1Q9Y576 335 aa24.47■■□□□ 1.51
SMAD6-202ENST00000557916 ACACBO00763 2458 aa24.47■■□□□ 1.51
SMAD6-202ENST00000557916 LOC105369274A0A096LPK9 316 aa24.46■■□□□ 1.51
SMAD6-202ENST00000557916 LOC102723532A0A0G2JNH3 316 aa24.46■■□□□ 1.51
SMAD6-202ENST00000557916 IQCJ-SCHIP1C9J366 451 aaPredicted RBP24.46■■□□□ 1.51
SMAD6-202ENST00000557916 H3BMH7 237 aa24.46■■□□□ 1.51
SMAD6-202ENST00000557916 SRPX2O60687 465 aaPredicted RBP24.46■■□□□ 1.51
SMAD6-202ENST00000557916 SMIM24O75264 130 aa24.46■■□□□ 1.51
SMAD6-202ENST00000557916 NTRK1P04629 796 aa24.46■■□□□ 1.51
SMAD6-202ENST00000557916 KRT4P19013 534 aa24.46■■□□□ 1.51
SMAD6-202ENST00000557916 GNAZP19086 355 aa24.46■■□□□ 1.51
SMAD6-202ENST00000557916 VSX2P58304 361 aaPredicted RBP24.46■■□□□ 1.51
SMAD6-202ENST00000557916 CATSPEREQ5SY80 951 aa24.46■■□□□ 1.51
SMAD6-202ENST00000557916 LRRC70Q7Z2Q7 622 aa24.46■■□□□ 1.51
SMAD6-202ENST00000557916 OR4N4Q8N0Y3 316 aa24.46■■□□□ 1.51
SMAD6-202ENST00000557916 C4orf33Q8N1A6 199 aa24.46■■□□□ 1.51
SMAD6-202ENST00000557916 TMEM151AQ8N4L1 468 aa24.46■■□□□ 1.51
SMAD6-202ENST00000557916 SNX31Q8N9S9 440 aa24.46■■□□□ 1.51
SMAD6-202ENST00000557916 CAPS2Q9BXY5 557 aa24.46■■□□□ 1.51
SMAD6-202ENST00000557916 PCDHB3Q9Y5E6 796 aa24.46■■□□□ 1.51
SMAD6-202ENST00000557916 APC2O95996 2303 aa24.46■■□□□ 1.51
SMAD6-202ENST00000557916 TAF4O00268 1085 aa24.45■■□□□ 1.51
SMAD6-202ENST00000557916 GLRA3O75311 464 aa24.45■■□□□ 1.51
SMAD6-202ENST00000557916 DLGAP3O95886 979 aa24.45■■□□□ 1.51
SMAD6-202ENST00000557916 SBK3P0C264 359 aa24.45■■□□□ 1.51
SMAD6-202ENST00000557916 LIPCP11150 499 aa24.45■■□□□ 1.51
SMAD6-202ENST00000557916 GRK3P35626 688 aa24.45■■□□□ 1.51
SMAD6-202ENST00000557916 CCT5P48643 541 aa24.45■■□□□ 1.51
SMAD6-202ENST00000557916 PDK4Q16654 411 aa24.45■■□□□ 1.51
SMAD6-202ENST00000557916 TCTE1Q5JU00 501 aa24.45■■□□□ 1.51
SMAD6-202ENST00000557916 TLDC1Q6P9B6 456 aa24.45■■□□□ 1.51
SMAD6-202ENST00000557916 NXPE4Q6UWF7 544 aa24.45■■□□□ 1.51
SMAD6-202ENST00000557916 TRABD2AQ86V40 505 aa24.45■■□□□ 1.51
SMAD6-202ENST00000557916 PTGR2Q8N8N7 351 aaPredicted RBP24.45■■□□□ 1.51
SMAD6-202ENST00000557916 OR4K1Q8NGD4 311 aa24.45■■□□□ 1.51
SMAD6-202ENST00000557916 NAF1Q96HR8 494 aaKnown RBP24.45■■□□□ 1.51
SMAD6-202ENST00000557916 ZNF285Q96NJ3 590 aa24.45■■□□□ 1.51
SMAD6-202ENST00000557916 OR2A5Q96R48 311 aa24.45■■□□□ 1.51
SMAD6-202ENST00000557916 PELI2Q9HAT8 420 aa24.45■■□□□ 1.51
SMAD6-202ENST00000557916 GPRC5BQ9NZH0 403 aa24.45■■□□□ 1.51
SMAD6-202ENST00000557916 OPTCQ9UBM4 332 aa24.45■■□□□ 1.51
SMAD6-202ENST00000557916 RAXQ9Y2V3 346 aa24.45■■□□□ 1.51
SMAD6-202ENST00000557916 AP1M2Q9Y6Q5 423 aa24.45■■□□□ 1.51
SMAD6-202ENST00000557916 H0YGG7 62 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 COPEO14579 308 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 ZSCAN9O15535 394 aaPredicted RBP24.44■■□□□ 1.5
SMAD6-202ENST00000557916 ZNF749O43361 778 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 CPNE3O75131 537 aaKnown RBP24.44■■□□□ 1.5
SMAD6-202ENST00000557916 EIF2S1P05198 315 aaKnown RBP24.44■■□□□ 1.5
SMAD6-202ENST00000557916 ARF3P61204 181 aaPredicted RBP24.44■■□□□ 1.5
SMAD6-202ENST00000557916 RPS15AP62244 130 aaKnown RBP24.44■■□□□ 1.5
SMAD6-202ENST00000557916 MEF2AQ02078 507 aaPredicted RBP24.44■■□□□ 1.5
SMAD6-202ENST00000557916 SLC18A2Q05940 514 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 WASHC2DQ5SRD0 308 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 CEP85LQ5SZL2 805 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 LRIG3Q6UXM1 1119 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 TIPARPQ7Z3E1 657 aaKnown RBP24.44■■□□□ 1.5
SMAD6-202ENST00000557916 TMPRSS11BQ86T26 416 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 DTX1Q86Y01 620 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 ZNF655Q8N720 491 aaPredicted RBP24.44■■□□□ 1.5
SMAD6-202ENST00000557916 GALNT6Q8NCL4 622 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 KCNE4Q8WWG9 221 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 PHF21BQ96EK2 531 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 SLC7A5P2Q9GIP4 190 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 ACTR5Q9H9F9 607 aaPredicted RBP24.44■■□□□ 1.5
SMAD6-202ENST00000557916 STARD5Q9NSY2 213 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 TNPO3Q9Y5L0 923 aaKnown RBP24.44■■□□□ 1.5
SMAD6-202ENST00000557916 HEATR5BQ9P2D3 2071 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 TPRP12270 2363 aaKnown RBP24.44■■□□□ 1.5
SMAD6-202ENST00000557916 TEX51A0A1B0GUA7 166 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 FEZF1A0PJY2 475 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 K7EPI3 171 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 CLGNO14967 610 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 RAD1O60671 282 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 CRHR1P34998 444 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 EIF2S3P41091 472 aaKnown RBP24.44■■□□□ 1.5
SMAD6-202ENST00000557916 PCBP2Q15366 365 aaKnown RBP eCLIP24.44■■□□□ 1.5
SMAD6-202ENST00000557916 TGIF1Q15583 401 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 C6orf15Q6UXA7 325 aaPredicted RBP24.44■■□□□ 1.5
SMAD6-202ENST00000557916 SRRM1Q8IYB3 904 aaKnown RBP24.44■■□□□ 1.5
SMAD6-202ENST00000557916 RERGQ96A58 199 aaPredicted RBP24.44■■□□□ 1.5
SMAD6-202ENST00000557916 SYNPO2LQ9H987 977 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 GRID1Q9ULK0 1009 aa24.44■■□□□ 1.5
SMAD6-202ENST00000557916 SDK2Q58EX2 2172 aa24.43■■□□□ 1.5
SMAD6-202ENST00000557916 RGS16O15492 202 aaPredicted RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms