RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 ZNF669Q96BR6 464 aaPredicted RBP15.12■□□□□ 0.01
TUBB3-213ENST00000557262 C8orf44Q96CB5 159 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 SLC30A3Q99726 388 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 TRIM56Q9BRZ2 755 aaKnown RBP15.12■□□□□ 0.01
TUBB3-213ENST00000557262 CCDC68Q9H2F9 335 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 XAB2Q9HCS7 855 aaKnown RBP15.12■□□□□ 0.01
TUBB3-213ENST00000557262 NSG1A0A0A6YYJ2 146 aa15.11■□□□□ 0.01
TUBB3-213ENST00000557262 IDSB3KWA1 339 aa15.11■□□□□ 0.01
TUBB3-213ENST00000557262 GFYI3L273 518 aa15.11■□□□□ 0.01
TUBB3-213ENST00000557262 PCDH17O14917 1159 aa15.11■□□□□ 0.01
TUBB3-213ENST00000557262 CLDN1O95832 211 aa15.11■□□□□ 0.01
TUBB3-213ENST00000557262 EZRP15311 586 aaKnown RBP15.11■□□□□ 0.01
TUBB3-213ENST00000557262 SLC26A3P40879 764 aa15.11■□□□□ 0.01
TUBB3-213ENST00000557262 HKDC1Q2TB90 917 aa15.11■□□□□ 0.01
TUBB3-213ENST00000557262 RPUSD3Q6P087 351 aaKnown RBP15.11■□□□□ 0.01
TUBB3-213ENST00000557262 TTC27Q6P3X3 843 aa15.11■□□□□ 0.01
TUBB3-213ENST00000557262 LURAP1LQ8IV03 231 aa15.11■□□□□ 0.01
TUBB3-213ENST00000557262 DENND6AQ8IWF6 608 aa15.11■□□□□ 0.01
TUBB3-213ENST00000557262 LMNTD2Q8IXW0 634 aa15.11■□□□□ 0.01
TUBB3-213ENST00000557262 PPFIBP2Q8ND30 876 aa15.11■□□□□ 0.01
TUBB3-213ENST00000557262 CATSPER1Q8NEC5 780 aa15.11■□□□□ 0.01
TUBB3-213ENST00000557262 KCNJ9Q92806 393 aa15.11■□□□□ 0.01
TUBB3-213ENST00000557262 RERGQ96A58 199 aaPredicted RBP15.11■□□□□ 0.01
TUBB3-213ENST00000557262 MMABQ96EY8 250 aaPredicted RBP15.11■□□□□ 0.01
TUBB3-213ENST00000557262 TGIF2Q9GZN2 237 aa15.11■□□□□ 0.01
TUBB3-213ENST00000557262 MKKSQ9NPJ1 570 aaPredicted RBP15.11■□□□□ 0.01
TUBB3-213ENST00000557262 FBXO6Q9NRD1 293 aaPredicted RBP15.11■□□□□ 0.01
TUBB3-213ENST00000557262 C14orf105Q9NVL8 296 aa15.11■□□□□ 0.01
TUBB3-213ENST00000557262 MED16Q9Y2X0 877 aa15.11■□□□□ 0.01
TUBB3-213ENST00000557262 DHRS7Q9Y394 339 aa15.11■□□□□ 0.01
TUBB3-213ENST00000557262 CNTRLQ7Z7A1 2325 aa15.11■□□□□ 0.01
TUBB3-213ENST00000557262 ZCWPW2A0A1B0GU75 182 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 A0A1W2PQ72 361 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 SMAPO00193 183 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 FOXS1O43638 330 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 SYF2O95926 243 aaKnown RBP15.1■□□□□ 0.01
TUBB3-213ENST00000557262 HEXBP07686 556 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 ANXA5P08758 320 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 PRR35P0CG20 571 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 COX6A1P12074 109 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 ENO3P13929 434 aaPredicted RBP15.1■□□□□ 0.01
TUBB3-213ENST00000557262 EDN3P14138 238 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 FDXRP22570 491 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 CUL1Q13616 776 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 FAM53BQ14153 422 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 ZNF549Q6P9A3 640 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 LRRC56Q8IYG6 542 aaPredicted RBP15.1■□□□□ 0.01
TUBB3-213ENST00000557262 RASGEF1CQ8N431 466 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 AMER3Q8N944 861 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 OR1N1Q8NGS0 311 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 GIMAP7Q8NHV1 300 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 CALML6Q8TD86 181 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 PSMF1Q92530 271 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 PBKQ96KB5 322 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 EBNA1BP2Q99848 306 aaKnown RBP15.1■□□□□ 0.01
TUBB3-213ENST00000557262 SYNPO2LQ9H987 977 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 ABCF3Q9NUQ8 709 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 PCYOX1Q9UHG3 505 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 COMMD10Q9Y6G5 202 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 DOPEY1Q5JWR5 2465 aa15.1■□□□□ 0.01
TUBB3-213ENST00000557262 IGHV1-45A0A0A0MS14 117 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 A0A0A6YYC8 382 aaPredicted RBP15.09■□□□□ 0.01
TUBB3-213ENST00000557262 DYTNA2CJ06 578 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 GOLGA8MH3BSY2 632 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 I3L1I5 382 aaPredicted RBP15.09■□□□□ 0.01
TUBB3-213ENST00000557262 FFAR3O14843 346 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 GPR42O15529 346 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 SERPINA7P05543 415 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 F7P08709 466 aaPredicted RBP15.09■□□□□ 0.01
TUBB3-213ENST00000557262 COL8A1P27658 744 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 COILP38432 576 aaPredicted RBP15.09■□□□□ 0.01
TUBB3-213ENST00000557262 SKIV2L2P42285 1042 aaKnown RBP15.09■□□□□ 0.01
TUBB3-213ENST00000557262 NDUFA9Q16795 377 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 LONRF1Q17RB8 773 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 THEMIS2Q5TEJ8 643 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 FAAH2Q6GMR7 532 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 ADCK2Q7Z695 626 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 ARHGEF39Q8N4T4 335 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 HAS2Q92819 552 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 SIGLEC10Q96LC7 697 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 SERPINB12Q96P63 405 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 GPR21Q99679 349 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 DRC3Q9H069 523 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 C20orf96Q9NUD7 363 aaPredicted RBP15.09■□□□□ 0.01
TUBB3-213ENST00000557262 TMEM184CQ9NVA4 438 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 PTGFRNQ9P2B2 879 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 FBXO5Q9UKT4 447 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 PPP2R2CQ9Y2T4 447 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 NEU2Q9Y3R4 380 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 MAD1L1Q9Y6D9 718 aa15.09■□□□□ 0.01
TUBB3-213ENST00000557262 LOC102723996A0A087X1L8 192 aa15.08■□□□□ 0
TUBB3-213ENST00000557262 H7BY64 318 aa15.08■□□□□ 0
TUBB3-213ENST00000557262 KIF5CO60282 957 aa15.08■□□□□ 0
TUBB3-213ENST00000557262 WFS1O76024 890 aa15.08■□□□□ 0
TUBB3-213ENST00000557262 HAUS5O94927 633 aa15.08■□□□□ 0
TUBB3-213ENST00000557262 BMP10O95393 424 aa15.08■□□□□ 0
TUBB3-213ENST00000557262 ICAM2P13598 275 aa15.08■□□□□ 0
TUBB3-213ENST00000557262 HRH2P25021 359 aa15.08■□□□□ 0
TUBB3-213ENST00000557262 SOX11P35716 441 aa15.08■□□□□ 0
TUBB3-213ENST00000557262 SLC1A2P43004 574 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms