RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 ADSLP30566 484 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-223ENST00000557076 SPINT3P49223 89 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 DMPKQ09013 629 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 SLC10A7Q0GE19 358 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 ABRQ12979 859 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 CEBPEQ15744 281 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 CDO1Q16878 200 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 CCDC40Q4G0X9 1142 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 RABL3Q5HYI8 236 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 FKBP15Q5T1M5 1219 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 HENMT1Q5T8I9 393 aaKnown RBP4.52□□□□□ -1.69
SCFD1-223ENST00000557076 RHBDD2Q6NTF9 364 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 FBXO38Q6PIJ6 1188 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 TRIM65Q6PJ69 517 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 KIRREL2Q6UWL6 708 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 TMEM200AQ86VY9 491 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 FAM71AQ8IYT1 594 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 EMC1Q8N766 993 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 DNAAF3Q8N9W5 541 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 MSANTD4Q8NCY6 345 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 C3orf20Q8ND61 904 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 OR5AN1Q8NGI8 311 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 LILRB4Q8NHJ6 448 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 PROKR1Q8TCW9 393 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 GPT2Q8TD30 523 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 NRGNQ92686 78 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 SNX21Q969T3 373 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 FOXRED1Q96CU9 486 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-223ENST00000557076 DHTKD1Q96HY7 919 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-223ENST00000557076 CELF6Q96J87 481 aaKnown RBP4.52□□□□□ -1.69
SCFD1-223ENST00000557076 VPS50Q96JG6 964 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 GSDMAQ96QA5 445 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 VKORC1Q9BQB6 163 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 TIMM29Q9BSF4 260 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 NDC1Q9BTX1 674 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 SLC7A5P2Q9GIP4 190 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 OR2AG1Q9H205 316 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 RMND1Q9NWS8 449 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 STMN3Q9NZ72 180 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 IFT80Q9P2H3 777 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-223ENST00000557076 SH3BGRL2Q9UJC5 107 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 FBXL4Q9UKA2 621 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 FZD10Q9ULW2 581 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 WDR37Q9Y2I8 494 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.52□□□□□ -1.69
SCFD1-223ENST00000557076 TNFRSF18Q9Y5U5 241 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 DOCK10Q96BY6 2186 aa4.52□□□□□ -1.69
SCFD1-223ENST00000557076 UBE2QL1A1L167 161 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 EIF3CLB5ME19 914 aaKnown RBP4.51□□□□□ -1.69
SCFD1-223ENST00000557076 SOCS6O14544 535 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 CNOT3O75175 753 aaKnown RBP4.51□□□□□ -1.69
SCFD1-223ENST00000557076 WISP2O76076 250 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 MTA2O94776 668 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 TOXO94900 526 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 CDK14O94921 469 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 ONECUT2O95948 504 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 PDHA1P08559 390 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 CBSLP0DN79 551 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 VSIG10L2P0DP72 767 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 CTPS1P17812 591 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 VCLP18206 1134 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 SLC9A1P19634 815 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 DNASE1P24855 282 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 HSD3B2P26439 372 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 RFC1P35251 1148 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-223ENST00000557076 CBSP35520 551 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 SPAM1P38567 509 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 HALP42357 657 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 NDUFA8P51970 172 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 KPNA2P52292 529 aaKnown RBP4.51□□□□□ -1.69
SCFD1-223ENST00000557076 ARG2P78540 354 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 CACNG1Q06432 222 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 TFF3Q07654 80 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 TRAF2Q12933 501 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 SEPT7Q16181 437 aaKnown RBP4.51□□□□□ -1.69
SCFD1-223ENST00000557076 RPE65Q16518 533 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 C21orf62-AS1Q17RA5 79 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 INSCQ1MX18 579 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 C2CD6Q53TS8 623 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 TDRD12Q587J7 1177 aaKnown RBP4.51□□□□□ -1.69
SCFD1-223ENST00000557076 ARMC6Q6NXE6 501 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 TTI2Q6NXR4 508 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 GJB7Q6PEY0 223 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 LINC00696Q6ZRV3 163 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 ADGRG6Q86SQ4 1221 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 LRRTM4Q86VH4 590 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 OOSP2Q86WS3 158 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 ZNF547Q8IVP9 402 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 ARHGAP12Q8IWW6 846 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 EID3Q8N140 333 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 FAM172AQ8WUF8 416 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 THOC3Q96J01 351 aaKnown RBP4.51□□□□□ -1.69
SCFD1-223ENST00000557076 LYSMD1Q96S90 227 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 DMRTA2Q96SC8 542 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 MNTQ99583 582 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 EIF3CQ99613 913 aaKnown RBP4.51□□□□□ -1.69
SCFD1-223ENST00000557076 MGME1Q9BQP7 344 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 TLR10Q9BXR5 811 aa4.51□□□□□ -1.69
SCFD1-223ENST00000557076 XPO4Q9C0E2 1151 aaKnown RBP4.51□□□□□ -1.69
SCFD1-223ENST00000557076 PDCL3Q9H2J4 239 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms