RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 KCNJ2P63252 427 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 SATB1Q01826 763 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 DUSP2Q05923 314 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 KDSRQ06136 332 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 CDC16Q13042 620 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 LCP2Q13094 533 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 TUBB3Q13509 450 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 ARHGEF7Q14155 803 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 CHRNA6Q15825 494 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 PFKFB4Q16877 469 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 TTLL9Q3SXZ7 439 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 SETMARQ53H47 684 aaPredicted RBP4.36□□□□□ -1.71
SRP54-212ENST00000556992 UNC50Q53HI1 259 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 ZNF805Q5CZA5 627 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 CDKL4Q5MAI5 379 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 ATAT1Q5SQI0 421 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 ZNF678Q5SXM1 525 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 C9orf50Q5SZB4 431 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 C6orf163Q5TEZ5 329 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 ERAP2Q6P179 960 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 METTL2BQ6P1Q9 378 aaKnown RBP4.36□□□□□ -1.71
SRP54-212ENST00000556992 FAM151BQ6UXP7 276 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 MACC1Q6ZN28 852 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 FRMD7Q6ZUT3 714 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 Q7L0L9 218 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 MAVSQ7Z434 540 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 GPR149Q86SP6 731 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 TTC7BQ86TV6 843 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 CUZD1Q86UP6 607 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 PIM3Q86V86 326 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 NRSN1Q8IZ57 195 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 NXPE1Q8N323 547 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 LILRB2Q8N423 598 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 FBXO39Q8N4B4 442 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 KIF2BQ8N4N8 673 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 CHCHD4Q8N4Q1 142 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 C12orf76Q8N812 135 aaPredicted RBP4.36□□□□□ -1.71
SRP54-212ENST00000556992 PTGR2Q8N8N7 351 aaPredicted RBP4.36□□□□□ -1.71
SRP54-212ENST00000556992 PNPLA1Q8N8W4 532 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 TMIEQ8NEW7 156 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 OR6K2Q8NGY2 324 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 CFAP61Q8NHU2 1237 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 RP9Q8TA86 221 aaKnown RBP4.36□□□□□ -1.71
SRP54-212ENST00000556992 ITFG1Q8TB96 612 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 BPIFB1Q8TDL5 484 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 EEF1AKMT1Q8WVE0 214 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 UCMAQ8WVF2 138 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 ING5Q8WYH8 240 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 EID2BQ96D98 161 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 PHF21BQ96EK2 531 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 DCUN1D1Q96GG9 259 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 KLHL32Q96NJ5 620 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 SMIM14Q96QK8 99 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 PANX3Q96QZ0 392 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 DCLRE1CQ96SD1 692 aaKnown RBP4.36□□□□□ -1.71
SRP54-212ENST00000556992 NEU1Q99519 415 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 COPS8Q99627 209 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 GPR21Q99679 349 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 EBF4Q9BQW3 602 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 LRFN3Q9BTN0 628 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 CIPCQ9C0C6 399 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 FAM83DQ9H4H8 585 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 ZDHHC6Q9H6R6 413 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 SLC28A3Q9HAS3 691 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 SPATS2LQ9NUQ6 558 aaKnown RBP4.36□□□□□ -1.71
SRP54-212ENST00000556992 ELOVL2Q9NXB9 296 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 NDE1Q9NXR1 346 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 TAS2R1Q9NYW7 299 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 PKD2L2Q9NZM6 624 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 ARMCX1Q9P291 453 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 IL36AQ9UHA7 158 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 ZDHHC2Q9UIJ5 367 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 CRLS1Q9UJA2 301 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 GNPTGQ9UJJ9 305 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 FAM50BQ9Y247 325 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 STK38LQ9Y2H1 464 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 CHD9Q3L8U1 2897 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 MGAMO43451 1857 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 DNAH12Q6ZR08 3092 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 TTC3P53804 2025 aa4.36□□□□□ -1.71
SRP54-212ENST00000556992 USP34Q70CQ2 3546 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 TRIP12Q14669 1992 aaPredicted RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 LOC100653049A0A140TA62 436 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 EDDM13A0A1B0GTR0 161 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 TSPAN11A1L157 253 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 TBC1D3BA6NDS4 549 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 NEMP2A6NFY4 417 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 NPIPB15A6NHN6 443 aaPredicted RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 C16orf96A6NNT2 1141 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 A8MX80 341 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 TTC34A8MYJ7 566 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 SUPT3HB4E1H0 165 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 EIF3FO00303 357 aaPredicted RBP4.35□□□□□ -1.71
SRP54-212ENST00000556992 CDC7O00311 574 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 QSOX1O00391 747 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 BTN3A1O00481 513 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 MGST3O14880 152 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 AZIN1O14977 448 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 CHUKO15111 745 aa4.35□□□□□ -1.71
SRP54-212ENST00000556992 UBDO15205 165 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms