RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 ANP32AP39687 249 aaKnown RBP8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 EMP3P54852 163 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 CSNK1G2P78368 415 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 MAT1AQ00266 395 aaKnown RBP8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 ALDH6A1Q02252 535 aaKnown RBP8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 FASTKD1Q53R41 847 aaKnown RBP8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 KRTCAP3Q53RY4 240 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 TSTD2Q5T7W7 516 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 SPINK14Q6IE38 97 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 LRRC8BQ6P9F7 803 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 TMEM205Q6UW68 189 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 C3P1Q6ZMU1 363 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 Q6ZPB1 254 aaPredicted RBP8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 VSTM4Q8IW00 320 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 DNAAF3Q8N9W5 541 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 ALG3Q92685 438 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 SIGLEC12Q96PQ1 595 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 TUBB6Q9BUF5 446 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 HES7Q9BYE0 225 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 ENKD1Q9H0I2 346 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 GPAMQ9HCL2 828 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 R3HDM2Q9Y2K5 976 aaKnown RBP8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 ANKHD1Q8IWZ3 2542 aaKnown RBP8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 HEATR5BQ9P2D3 2071 aa8.55□□□□□ -1.04
HNRNPC-227ENST00000556897 AKAP6Q13023 2319 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 ACANP16112 2415 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 INTS1Q8N201 2190 aaKnown RBP8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 IGKV1-8A0A0C4DH67 115 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 PRMT5O14744 637 aaPredicted RBP8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 PSMD3O43242 534 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 MAN1A2O60476 641 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 VPS26AO75436 327 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 ZNF189O75820 626 aaPredicted RBP8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 MLYCDO95822 493 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 GAS8O95995 478 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 ABOP16442 354 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 EEF1DP29692 281 aaKnown RBP8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 CMPK1P30085 196 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 PPARGP37231 505 aaPredicted RBP8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 CD96P40200 585 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 GRIA1P42261 906 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 RWDD2BP57060 319 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 SNRPNP63162 240 aaKnown RBP8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 PRAMEP78395 509 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 HSF1Q00613 529 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 CDH17Q12864 832 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 TSTA3Q13630 321 aaPredicted RBP8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 TUBA3CQ13748 450 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 NAA25Q14CX7 972 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 OR1C1Q15619 314 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 BTBD16Q32M84 506 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 ACER2Q5QJU3 275 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 PTRHD1Q6GMV3 140 aaKnown RBP8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 TUBA3EQ6PEY2 450 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 SUSD1Q6UWL2 747 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 MEX3BQ6ZN04 569 aaKnown RBP8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 LANCL3Q6ZV70 420 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 OTOAQ7RTW8 1153 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 LINC00523Q86TU6 105 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 SHISA5Q8N114 240 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 ARHGEF39Q8N4T4 335 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 ACBD4Q8NC06 268 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 MDS2Q8NDY4 140 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 AGAP11Q8TF27 550 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 CA5BP1Q8WTZ4 195 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 METTL21AQ8WXB1 218 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 FRMD6Q96NE9 622 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 OR2A5Q96R48 311 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 PLCD4Q9BRC7 762 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 TRIM51Q9BSJ1 452 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 TMEM121Q9BTD3 319 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 VN1R1Q9GZP7 353 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 DRC3Q9H069 523 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 MRPS30Q9NP92 439 aaKnown RBP8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 MARCH4Q9P2E8 410 aaPredicted RBP8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 TSR3Q9UJK0 312 aaKnown RBP8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 PCDHGB6Q9Y5F9 930 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 PCDHA13Q9Y5I0 950 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 MRFAP1Q9Y605 127 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 ABCA2Q9BZC7 2435 aa8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 ZNF469Q96JG9 3925 aaPredicted RBP8.54□□□□□ -1.04
HNRNPC-227ENST00000556897 ASPDHA6ND91 283 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 OR2W5A6NFC9 320 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 FANCGO15287 622 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 P2RX6O15547 441 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 CBFA2T2O43439 604 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 ASNA1O43681 348 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 PHF2O75151 1096 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 NADKO95544 446 aaPredicted RBP8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 PTMAP06454 111 aaKnown RBP8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 CD1EP15812 388 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 ADRA1DP25100 572 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 RPA3P35244 121 aaPredicted RBP8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 CCNFP41002 786 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 CETN2P41208 172 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 ACVR1Q04771 509 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 MINDY4Q4G0A6 757 aa8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 AARS2Q5JTZ9 985 aaKnown RBP8.53□□□□□ -1.04
HNRNPC-227ENST00000556897 MFSD4BQ5TF39 518 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms