RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 NXPE4Q6UWF7 544 aa16.8■□□□□ 0.28
PSEN1-218ENST00000556864 ZYG11AQ6WRX3 759 aa16.8■□□□□ 0.28
PSEN1-218ENST00000556864 MCATQ8IVS2 390 aaKnown RBP16.8■□□□□ 0.28
PSEN1-218ENST00000556864 USP7Q93009 1102 aa16.8■□□□□ 0.28
PSEN1-218ENST00000556864 RERGQ96A58 199 aaPredicted RBP16.8■□□□□ 0.28
PSEN1-218ENST00000556864 ZNF501Q96CX3 271 aaPredicted RBP16.8■□□□□ 0.28
PSEN1-218ENST00000556864 PHF21BQ96EK2 531 aa16.8■□□□□ 0.28
PSEN1-218ENST00000556864 THAP11Q96EK4 314 aa16.8■□□□□ 0.28
PSEN1-218ENST00000556864 PRR11Q96HE9 360 aaPredicted RBP16.8■□□□□ 0.28
PSEN1-218ENST00000556864 SLC46A1Q96NT5 459 aa16.8■□□□□ 0.28
PSEN1-218ENST00000556864 PRAP1Q96NZ9 151 aa16.8■□□□□ 0.28
PSEN1-218ENST00000556864 SELENOSQ9BQE4 189 aa16.8■□□□□ 0.28
PSEN1-218ENST00000556864 AIF1LQ9BQI0 150 aa16.8■□□□□ 0.28
PSEN1-218ENST00000556864 EFCAB11Q9BUY7 163 aa16.8■□□□□ 0.28
PSEN1-218ENST00000556864 EHD1Q9H4M9 534 aa16.8■□□□□ 0.28
PSEN1-218ENST00000556864 FAM60AQ9NP50 221 aa16.8■□□□□ 0.28
PSEN1-218ENST00000556864 ASCL3Q9NQ33 180 aa16.8■□□□□ 0.28
PSEN1-218ENST00000556864 SERTAD3Q9UJW9 196 aa16.8■□□□□ 0.28
PSEN1-218ENST00000556864 EMCNQ9ULC0 261 aa16.8■□□□□ 0.28
PSEN1-218ENST00000556864 SH2B3Q9UQQ2 575 aa16.8■□□□□ 0.28
PSEN1-218ENST00000556864 DCHS1Q96JQ0 3298 aa16.8■□□□□ 0.28
PSEN1-218ENST00000556864 E7EQ34 232 aa16.79■□□□□ 0.28
PSEN1-218ENST00000556864 RPS17P08708 135 aaKnown RBP16.79■□□□□ 0.28
PSEN1-218ENST00000556864 CXCR2P25025 360 aa16.79■□□□□ 0.28
PSEN1-218ENST00000556864 GABRA4P48169 554 aa16.79■□□□□ 0.28
PSEN1-218ENST00000556864 CSNK1G2P78368 415 aa16.79■□□□□ 0.28
PSEN1-218ENST00000556864 REEP5Q00765 189 aa16.79■□□□□ 0.28
PSEN1-218ENST00000556864 ASPHQ12797 758 aa16.79■□□□□ 0.28
PSEN1-218ENST00000556864 FBXO48Q5FWF7 155 aa16.79■□□□□ 0.28
PSEN1-218ENST00000556864 PAGE2BQ5JRK9 111 aa16.79■□□□□ 0.28
PSEN1-218ENST00000556864 TMEM126BQ8IUX1 230 aa16.79■□□□□ 0.28
PSEN1-218ENST00000556864 KRT78Q8N1N4 520 aa16.79■□□□□ 0.28
PSEN1-218ENST00000556864 TEX9Q8N6V9 391 aa16.79■□□□□ 0.28
PSEN1-218ENST00000556864 TTC29Q8NA56 475 aaPredicted RBP16.79■□□□□ 0.28
PSEN1-218ENST00000556864 SREK1Q8WXA9 508 aaKnown RBP16.79■□□□□ 0.28
PSEN1-218ENST00000556864 ESAMQ96AP7 390 aa16.79■□□□□ 0.28
PSEN1-218ENST00000556864 CTRCQ99895 268 aa16.79■□□□□ 0.28
PSEN1-218ENST00000556864 NLNQ9BYT8 704 aa16.79■□□□□ 0.28
PSEN1-218ENST00000556864 PITHD1Q9GZP4 211 aaPredicted RBP16.79■□□□□ 0.28
PSEN1-218ENST00000556864 TMBIM4Q9HC24 238 aa16.79■□□□□ 0.28
PSEN1-218ENST00000556864 SRPK3Q9UPE1 567 aa16.79■□□□□ 0.28
PSEN1-218ENST00000556864 STK38LQ9Y2H1 464 aa16.79■□□□□ 0.28
PSEN1-218ENST00000556864 A0A0J9YVX5 310 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 TRBC2A0A5B9 178 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 CDRT15L2A8MXV6 281 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 C9orf172C9J069 976 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 SRPX2O60687 465 aaPredicted RBP16.78■□□□□ 0.28
PSEN1-218ENST00000556864 PRAMEF10O60809 474 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 CTSVO60911 334 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 H2AFYO75367 372 aaKnown RBP16.78■□□□□ 0.28
PSEN1-218ENST00000556864 SPAG7O75391 227 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 SCRG1O75711 98 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 OR2B3O76000 313 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 SIX3O95343 332 aaPredicted RBP16.78■□□□□ 0.28
PSEN1-218ENST00000556864 SBK3P0C264 359 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 C1GALT1C1LP0DN25 315 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 NAA20P61599 178 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 HERVK_113P63132 956 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 YBX1P67809 324 aaKnown RBP16.78■□□□□ 0.28
PSEN1-218ENST00000556864 IRF8Q02556 426 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 CYP4F3Q08477 520 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 LAPTM5Q13571 262 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 GTF2H2Q13888 395 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 TBC1D25Q3MII6 688 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 TNFAIP8L3Q5GJ75 292 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 ATG9BQ674R7 924 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 GTF2H2CQ6P1K8 395 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 TLDC1Q6P9B6 456 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 GOLGA7Q7Z5G4 137 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 TMEM151AQ8N4L1 468 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 ZNF655Q8N720 491 aaPredicted RBP16.78■□□□□ 0.28
PSEN1-218ENST00000556864 OR4K1Q8NGD4 311 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 OR1L3Q8NH93 324 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 PPP4R1Q8TF05 950 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 GATA6Q92908 595 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 PTCD3Q96EY7 689 aaKnown RBP16.78■□□□□ 0.28
PSEN1-218ENST00000556864 C1QTNF3Q9BXJ4 246 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 ERVK-6Q9BXR3 956 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 ULBP3Q9BZM4 244 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 CCDC86Q9H6F5 360 aaKnown RBP16.78■□□□□ 0.28
PSEN1-218ENST00000556864 APMAPQ9HDC9 416 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 DKK4Q9UBT3 224 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 PILRAQ9UKJ1 303 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 PLLPQ9Y342 182 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 ASB1Q9Y576 335 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 B3GALT1Q9Y5Z6 326 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 AP1M2Q9Y6Q5 423 aa16.78■□□□□ 0.28
PSEN1-218ENST00000556864 UNC13CQ8NB66 2214 aa16.77■□□□□ 0.28
PSEN1-218ENST00000556864 E2F3O00716 465 aa16.77■□□□□ 0.28
PSEN1-218ENST00000556864 TXNDC9O14530 226 aa16.77■□□□□ 0.28
PSEN1-218ENST00000556864 ZSCAN9O15535 394 aaPredicted RBP16.77■□□□□ 0.28
PSEN1-218ENST00000556864 NRP2O60462 931 aa16.77■□□□□ 0.28
PSEN1-218ENST00000556864 DLX3O60479 287 aa16.77■□□□□ 0.28
PSEN1-218ENST00000556864 CPNE3O75131 537 aaKnown RBP16.77■□□□□ 0.28
PSEN1-218ENST00000556864 HBQ1P09105 142 aa16.77■□□□□ 0.28
PSEN1-218ENST00000556864 CPA3P15088 417 aa16.77■□□□□ 0.28
PSEN1-218ENST00000556864 GSTM2P28161 218 aa16.77■□□□□ 0.28
PSEN1-218ENST00000556864 SLC5A2P31639 672 aa16.77■□□□□ 0.28
PSEN1-218ENST00000556864 PRKAA2P54646 552 aa16.77■□□□□ 0.28
PSEN1-218ENST00000556864 SLBPQ14493 270 aaKnown RBP eCLIP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms