RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 EZRP15311 586 aaKnown RBP9.86□□□□□ -0.83
SHMT2-224ENST00000556737 OTX2P32243 289 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 ARF3P61204 181 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-224ENST00000556737 SNRPNP63162 240 aaKnown RBP9.86□□□□□ -0.83
SHMT2-224ENST00000556737 TLE1Q04724 770 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 PRDX1Q06830 199 aaKnown RBP9.86□□□□□ -0.83
SHMT2-224ENST00000556737 NKG7Q16617 165 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 ZXDCQ2QGD7 858 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-224ENST00000556737 FAM153CQ494X1 144 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 WASHC2DQ5SRD0 308 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 HECTD2Q5U5R9 776 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 LRRC8EQ6NSJ5 796 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 UGT3A1Q6NUS8 523 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 FBXO42Q6P3S6 717 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 EMBQ6PCB8 327 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 ZDHHC24Q6UX98 284 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 ASB18Q6ZVZ8 466 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 OVCH1Q7RTY7 1134 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 ANKMY2Q8IV38 441 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 METTL27Q8N6F8 245 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-224ENST00000556737 TTC29Q8NA56 475 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-224ENST00000556737 FBXO36Q8NEA4 188 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 GABPB2Q8TAK5 448 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-224ENST00000556737 UBLCP1Q8WVY7 318 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-224ENST00000556737 OR2A5Q96R48 311 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 NUDT9Q9BW91 350 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 WDR54Q9H977 334 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 ACSS2Q9NR19 701 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 MOCS1Q9NZB8 636 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 GPN3Q9UHW5 284 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-224ENST00000556737 IKZF3Q9UKT9 509 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 CORO1CQ9ULV4 474 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-224ENST00000556737 SH2B3Q9UQQ2 575 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 PDE10AQ9Y233 779 aa9.86□□□□□ -0.83
SHMT2-224ENST00000556737 RUVBL1Q9Y265 456 aaKnown RBP9.86□□□□□ -0.83
SHMT2-224ENST00000556737 HYKKA2RU49 373 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 MASP2O00187 686 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 ZBTB14O43829 449 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 WISP1O95388 367 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 ALBP02768 609 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 C8GP07360 202 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 H2AFXP16104 143 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-224ENST00000556737 ALAS2P22557 587 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 OR1D4P47884 311 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 RGS4P49798 205 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 CCL11P51671 97 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 ABATP80404 500 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 RELAQ04206 551 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 MGAT5Q09328 741 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 KLRB1Q12918 225 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 PDIA2Q13087 525 aaKnown RBP9.85□□□□□ -0.83
SHMT2-224ENST00000556737 TSTA3Q13630 321 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-224ENST00000556737 SSPNQ14714 243 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 HKDC1Q2TB90 917 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 PRAMEF13Q5VWM6 474 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 FAM45BPQ6NSW5 357 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 TMEM207Q6UWW9 146 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 MED25Q71SY5 747 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 ZC3HC1Q86WB0 502 aaKnown RBP9.85□□□□□ -0.83
SHMT2-224ENST00000556737 PLD3Q8IV08 490 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 MYO1HQ8N1T3 1032 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 GPATCH11Q8N954 259 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 TMEM102Q8N9M5 508 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-224ENST00000556737 EIF1ADQ8N9N8 165 aaKnown RBP9.85□□□□□ -0.83
SHMT2-224ENST00000556737 FDCSPQ8NFU4 85 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 FAM45AQ8TCE6 357 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 AENQ8WTP8 325 aaKnown RBP9.85□□□□□ -0.83
SHMT2-224ENST00000556737 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.85□□□□□ -0.83
SHMT2-224ENST00000556737 SLC25A23Q9BV35 468 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 TSPYL1Q9H0U9 437 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 SAYSD1Q9NPB0 183 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 PPANQ9NQ55 473 aaKnown RBP9.85□□□□□ -0.83
SHMT2-224ENST00000556737 CCDC177Q9NQR7 707 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-224ENST00000556737 SMYD2Q9NRG4 433 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 ZDHHC18Q9NUE0 388 aa9.85□□□□□ -0.83
SHMT2-224ENST00000556737 IGLV3-12A0A075B6K2 115 aa9.84□□□□□ -0.83
SHMT2-224ENST00000556737 VSTM2BA6NLU5 285 aa9.84□□□□□ -0.83
SHMT2-224ENST00000556737 SOCS6O14544 535 aa9.84□□□□□ -0.83
SHMT2-224ENST00000556737 SLC16A5O15375 505 aa9.84□□□□□ -0.83
SHMT2-224ENST00000556737 C1QAP02745 245 aa9.84□□□□□ -0.83
SHMT2-224ENST00000556737 EIF2S1P05198 315 aaKnown RBP9.84□□□□□ -0.83
SHMT2-224ENST00000556737 CD63P08962 238 aa9.84□□□□□ -0.83
SHMT2-224ENST00000556737 ZNF37AP17032 561 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-224ENST00000556737 MMP11P24347 488 aa9.84□□□□□ -0.83
SHMT2-224ENST00000556737 ECHS1P30084 290 aa9.84□□□□□ -0.83
SHMT2-224ENST00000556737 CSRP3P50461 194 aa9.84□□□□□ -0.83
SHMT2-224ENST00000556737 PGDP52209 483 aa9.84□□□□□ -0.83
SHMT2-224ENST00000556737 EMP3P54852 163 aa9.84□□□□□ -0.83
SHMT2-224ENST00000556737 PDAP1Q13442 181 aaKnown RBP9.84□□□□□ -0.83
SHMT2-224ENST00000556737 ZNF460Q14592 562 aa9.84□□□□□ -0.83
SHMT2-224ENST00000556737 SLMAPQ14BN4 828 aa9.84□□□□□ -0.83
SHMT2-224ENST00000556737 PPP1R3AQ16821 1122 aa9.84□□□□□ -0.83
SHMT2-224ENST00000556737 DCAF10Q5QP82 559 aa9.84□□□□□ -0.83
SHMT2-224ENST00000556737 AGTRAPQ6RW13 159 aa9.84□□□□□ -0.83
SHMT2-224ENST00000556737 SBSNQ6UWP8 590 aa9.84□□□□□ -0.83
SHMT2-224ENST00000556737 SHISA6Q6ZSJ9 500 aa9.84□□□□□ -0.83
SHMT2-224ENST00000556737 VN1R4Q7Z5H5 301 aa9.84□□□□□ -0.83
SHMT2-224ENST00000556737 SLC26A11Q86WA9 606 aa9.84□□□□□ -0.83
SHMT2-224ENST00000556737 ZBED8Q8IZ13 594 aa9.84□□□□□ -0.83
SHMT2-224ENST00000556737 CSNK1A1LQ8N752 337 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms