RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 DCDP81605 110 aaKnown RBP9.59□□□□□ -0.87
SCFD1-220ENST00000556486 TMPRSS15P98073 1019 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 PRKG2Q13237 762 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 KIR2DS3Q14952 304 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 CDSNQ15517 529 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 SLC5A12Q1EHB4 618 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 P3H1Q32P28 736 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 VWA2Q5GFL6 755 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 TLDC1Q6P9B6 456 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 STRA8Q7Z7C7 330 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 WDR75Q8IWA0 830 aaKnown RBP9.59□□□□□ -0.87
SCFD1-220ENST00000556486 MRPL41Q8IXM3 137 aaKnown RBP9.59□□□□□ -0.87
SCFD1-220ENST00000556486 OR5AR1Q8NGP9 310 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 PANX2Q96RD6 677 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 MENTQ9BUN1 341 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 TSPY26PQ9H489 355 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 XKR8Q9H6D3 395 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 IFT80Q9P2H3 777 aaPredicted RBP9.59□□□□□ -0.87
SCFD1-220ENST00000556486 NDOR1Q9UHB4 597 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 EPN1Q9Y6I3 576 aaPredicted RBP9.59□□□□□ -0.87
SCFD1-220ENST00000556486 NAV3Q8IVL0 2385 aa9.59□□□□□ -0.87
SCFD1-220ENST00000556486 MAP1AP78559 2803 aaPredicted RBP9.58□□□□□ -0.88
SCFD1-220ENST00000556486 CNTRLQ7Z7A1 2325 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 PCNX1Q96RV3 2341 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 MACROD2A1Z1Q3 448 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 ERI2A8K979 691 aaKnown RBP9.58□□□□□ -0.88
SCFD1-220ENST00000556486 PSMD3O43242 534 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 PRODHO43272 600 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 KDM1AO60341 852 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 METTL18O95568 372 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 PRSS56P0CW18 603 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 MSNP26038 577 aaKnown RBP9.58□□□□□ -0.88
SCFD1-220ENST00000556486 FOXN2P32314 431 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 ACVR1Q04771 509 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 Q0VFX4 171 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 SPARCL1Q14515 664 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 POU6F1Q14863 301 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 ZNF630Q2M218 657 aaPredicted RBP9.58□□□□□ -0.88
SCFD1-220ENST00000556486 NKAIN1Q4KMZ8 207 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 GFRALQ6UXV0 394 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 ARHGEF18Q6ZSZ5 1173 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 NCCRP1Q6ZVX7 275 aaPredicted RBP9.58□□□□□ -0.88
SCFD1-220ENST00000556486 ZNF227Q86WZ6 799 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 WFDC8Q8IUA0 241 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 DNAJC22Q8N4W6 341 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 OR1N1Q8NGS0 311 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 SLC35B2Q8TB61 432 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 PPP4R1Q8TF05 950 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 N4BP2L2Q92802 583 aaPredicted RBP9.58□□□□□ -0.88
SCFD1-220ENST00000556486 PEX13Q92968 403 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 RELTQ969Z4 430 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 FKBP10Q96AY3 582 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 PTERQ96BW5 349 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 ZNF285Q96NJ3 590 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 TAAR6Q96RI8 345 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 SLC26A1Q9H2B4 701 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 WDR54Q9H977 334 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 IRAK4Q9NWZ3 460 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 SPHK1Q9NYA1 384 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 SMARCAL1Q9NZC9 954 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 ASF1AQ9Y294 204 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 NEU2Q9Y3R4 380 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 KLF2Q9Y5W3 355 aaPredicted RBP9.58□□□□□ -0.88
SCFD1-220ENST00000556486 DUSP10Q9Y6W6 482 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 FBN3Q75N90 2809 aa9.58□□□□□ -0.88
SCFD1-220ENST00000556486 A0A1B0GTL3 188 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 GRID2IPA4D2P6 1211 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 GOLGA6L9A6NEM1 432 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 MIF4GDA9UHW6 222 aaKnown RBP9.57□□□□□ -0.88
SCFD1-220ENST00000556486 F8W8V4 182 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 AGPSO00116 658 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 CLEC3AO75596 197 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 SNRNP200O75643 2136 aaKnown RBP9.57□□□□□ -0.88
SCFD1-220ENST00000556486 WISP2O76076 250 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 KLHL18O94889 574 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 SUN1O94901 812 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 UNC5CO95185 931 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 FKBP9O95302 570 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 ALBP02768 609 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 OR56A5P0C7T3 313 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 HOXB4P17483 251 aaPredicted RBP9.57□□□□□ -0.88
SCFD1-220ENST00000556486 MMP11P24347 488 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 PEBP1P30086 187 aaKnown RBP9.57□□□□□ -0.88
SCFD1-220ENST00000556486 RAB28P51157 221 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 TDGF1P3P51864 188 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 ID3Q02535 119 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 AIMP2Q13155 320 aaKnown RBP9.57□□□□□ -0.88
SCFD1-220ENST00000556486 DNAJC21Q5F1R6 531 aaKnown RBP9.57□□□□□ -0.88
SCFD1-220ENST00000556486 AGAP7PQ5VUJ5 663 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 PRAMEF13Q5VWM6 474 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 IGFL2Q6UWQ7 119 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 MICALCLQ6ZW33 695 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 TAS2R42Q7RTR8 314 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 LINC00523Q86TU6 105 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 HOOK3Q86VS8 718 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 SLC22A15Q8IZD6 547 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 ZNF655Q8N720 491 aaPredicted RBP9.57□□□□□ -0.88
SCFD1-220ENST00000556486 AMER2Q8N7J2 671 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 BCORP1Q8N888 145 aa9.57□□□□□ -0.88
SCFD1-220ENST00000556486 FAM71DQ8N9W8 422 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms