RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 PLOD3O60568 738 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 PMPCBO75439 489 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 KDM4BO94953 1096 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 MLYCDO95822 493 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 OGNP20774 298 aaKnown RBP8.33□□□□□ -1.08
MARK3-210ENST00000556463 PXNP49023 591 aaPredicted RBP8.33□□□□□ -1.08
MARK3-210ENST00000556463 GTF2H3Q13889 308 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 FGFBP1Q14512 234 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 ZNF404Q494X3 552 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 C19orf48Q6RUI8 117 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 LDB1Q86U70 411 aaPredicted RBP8.33□□□□□ -1.08
MARK3-210ENST00000556463 HIPK1Q86Z02 1210 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 ANKRD53Q8N9V6 530 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 ANGPTL6Q8NI99 470 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 FBXO30Q8TB52 745 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 ARRDC2Q8TBH0 407 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 STAG3L4Q8TBR4 150 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 PPP1R13LQ8WUF5 828 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 CRELD1Q96HD1 420 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 ZNF382Q96SR6 550 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 HTATIP2Q9BUP3 242 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 ATXN3LQ9H3M9 355 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 KAT8Q9H7Z6 458 aaKnown RBP8.33□□□□□ -1.08
MARK3-210ENST00000556463 TRIM45Q9H8W5 580 aaPredicted RBP8.33□□□□□ -1.08
MARK3-210ENST00000556463 ACTR8Q9H981 624 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 PLCL2Q9UPR0 1127 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 TMEM5Q9Y2B1 443 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 PKP3Q9Y446 797 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 CLCA3PQ9Y6N3 262 aa8.33□□□□□ -1.08
MARK3-210ENST00000556463 E9PAM4 449 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 M0R082 166 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 PSIP1O75475 530 aaKnown RBP8.32□□□□□ -1.08
MARK3-210ENST00000556463 ECI2O75521 394 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 TXNP10599 105 aaKnown RBP8.32□□□□□ -1.08
MARK3-210ENST00000556463 NAGAP17050 411 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 POU3F3P20264 500 aaPredicted RBP8.32□□□□□ -1.08
MARK3-210ENST00000556463 M6PRP20645 277 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 IGFBP6P24592 240 aaPredicted RBP8.32□□□□□ -1.08
MARK3-210ENST00000556463 HK3P52790 923 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 RABGGTBP53611 331 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 RUNDC3AQ59EK9 446 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 BRMS1LQ5PSV4 323 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 ANKS6Q68DC2 871 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 OTOP2Q7RTS6 562 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 CTU1Q7Z7A3 348 aaKnown RBP8.32□□□□□ -1.08
MARK3-210ENST00000556463 ADHFE1Q8IWW8 467 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 ZNF557Q8N988 423 aaPredicted RBP8.32□□□□□ -1.08
MARK3-210ENST00000556463 ZNF454Q8N9F8 522 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 SIMC1Q8NDZ2 872 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 APH1BQ8WW43 257 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 TRAF4Q9BUZ4 470 aaPredicted RBP8.32□□□□□ -1.08
MARK3-210ENST00000556463 DPCDQ9BVM2 203 aaPredicted RBP8.32□□□□□ -1.08
MARK3-210ENST00000556463 ZBTB20Q9HC78 741 aaPredicted RBP8.32□□□□□ -1.08
MARK3-210ENST00000556463 NUP50Q9UKX7 468 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 LRFN2Q9ULH4 789 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 PTCH2Q9Y6C5 1203 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 STON1Q9Y6Q2 735 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 PCNTO95613 3336 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 CHD5Q8TDI0 1954 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 STX7O15400 261 aaKnown RBP8.32□□□□□ -1.08
MARK3-210ENST00000556463 AIREO43918 545 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 DPM1O60762 260 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 MT-ND2P03891 347 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 Q5BKY6 102 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 BHLHB9Q6PI77 547 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 AHSA2Q719I0 299 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 KRT73Q86Y46 540 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 TMEM151BQ8IW70 566 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 NLGN4XQ8N0W4 816 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 AMER2Q8N7J2 671 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 SLC38A4Q969I6 547 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 PABPC5Q96DU9 382 aaKnown RBP8.32□□□□□ -1.08
MARK3-210ENST00000556463 RNF170Q96K19 258 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 HHIPQ96QV1 700 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 CLEC4MQ9H2X3 399 aaPredicted RBP8.32□□□□□ -1.08
MARK3-210ENST00000556463 SCN3BQ9NY72 215 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 TRAPPC4Q9Y296 219 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 VPS9D1Q9Y2B5 631 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 TPRKBQ9Y3C4 175 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 OR51F1A6NGY5 319 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 FADS2P1A8MWK0 482 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 OR5F1O95221 314 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 SLC25A27O95847 323 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 HTR3AP46098 478 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 DAPP51397 102 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 STC1P52823 247 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 DEFA5Q01523 94 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 MXD1Q05195 221 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 ABRQ12979 859 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 NFE2L1Q14494 772 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 DMC1Q14565 340 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 MAD2L1BPQ15013 274 aaPredicted RBP8.32□□□□□ -1.08
MARK3-210ENST00000556463 PARP15Q460N3 678 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 OXLD1Q5BKU9 147 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 SIRPB2Q5JXA9 342 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 NOTUMQ6P988 496 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 TSPYL5Q86VY4 417 aaPredicted RBP8.32□□□□□ -1.08
MARK3-210ENST00000556463 UBQLNLQ8IYU4 475 aa8.32□□□□□ -1.08
MARK3-210ENST00000556463 UMODL1-AS1Q8N2C9 162 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms