RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 RNASE12Q5GAN4 147 aaKnown RBP14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 LETMD1Q6P1Q0 360 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 FBXO22Q8NEZ5 403 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 TBC1D15Q8TC07 691 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 BRI3BPQ8WY22 251 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 KLHL6Q8WZ60 621 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 ZNF451Q9Y4E5 1061 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 CPQQ9Y646 472 aa14.61□□□□□ -0.07
ARHGEF40-207ENST00000556399 TRBC2A0A5B9 178 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 A8MV72 311 aaPredicted RBP14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 NEDD8-MDP1E9PL57 170 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 SSR2P43308 183 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 XKP51811 444 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 NPRL3Q12980 569 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 CDK5R2Q13319 367 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 GTDC1Q4AE62 458 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.6□□□□□ -0.071e-6■■□□□ 12.7
ARHGEF40-207ENST00000556399 MACC1Q6ZN28 852 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 ZNF598Q86UK7 904 aaKnown RBP14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 IZUMO1Q8IYV9 350 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 PELI3Q8N2H9 469 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 AQP11Q8NBQ7 271 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 ZMIZ2Q8NF64 920 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 NFKBIDQ8NI38 313 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 MAELQ96JY0 434 aaKnown RBP14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 CEP295NLQ96MC4 621 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 FCRL4Q96PJ5 515 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 MAPKAP1Q9BPZ7 522 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 RNF38Q9H0F5 515 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 MED28Q9H204 178 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 ZNF510Q9Y2H8 683 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 OR6C70A6NIJ9 312 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 RFPL2O75678 378 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 PDYNP01213 254 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 CBSLP0DN79 551 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 FUT4P22083 530 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 CBSP35520 551 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 PNLIPRP1P54315 467 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 UFD1Q92890 307 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 C11orf24Q96F05 449 aaPredicted RBP14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 CXCL16Q9H2A7 254 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 TMLHEQ9NVH6 421 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 C14orf119Q9NWQ9 140 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 MS4A12Q9NXJ0 267 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 SLAMF8Q9P0V8 285 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 VPS51Q9UID3 782 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 CLEC4AQ9UMR7 237 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 CRHBPP24387 322 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 AP1S2P56377 157 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 CCBE1Q6UXH8 406 aaPredicted RBP14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 CFAP206Q8IYR0 622 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 ZFP90Q8TF47 636 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 RASSF5Q8WWW0 418 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 ERVK-11Q9UQG0 969 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 OARD1Q9Y530 152 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 NHSQ6T4R5 1651 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 GABBR2O75899 941 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 FLT3LGP49771 235 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 MTAPQ13126 283 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 PLA2G4EQ3MJ16 856 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 SPRED1Q7Z699 444 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 NPAS3Q8IXF0 933 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 YIPF2Q9BWQ6 316 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 CCDC177Q9NQR7 707 aaPredicted RBP14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 VAPAQ9P0L0 249 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 HSPE1-MOB4S4R3N1 261 aa14.6□□□□□ -0.07
ARHGEF40-207ENST00000556399 AHDC1Q5TGY3 1603 aaPredicted RBP14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 NRAPQ86VF7 1730 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 A0A1B0GTW7 788 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 POP4O95707 220 aaKnown RBP14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 RPS17P08708 135 aaKnown RBP14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 STAT5AP42229 794 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 OR1E2P47887 323 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 NKX2-5P52952 324 aaPredicted RBP14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 FBXW4P57775 412 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 CDK6Q00534 326 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 NOXRED1Q6NXP6 359 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 MBOAT1Q6ZNC8 495 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 NETO1Q8TDF5 533 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 C2orf15Q8WU43 125 aaKnown RBP14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 AP2M1Q96CW1 435 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 PHOX2BQ99453 314 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 AIF1LQ9BQI0 150 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 ASAH2Q9NR71 780 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 CD300AQ9UGN4 299 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 CCRL2O00421 344 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 CNMDO75829 334 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 SLITRK5O94991 958 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 CSTF2P33240 577 aaKnown RBP eCLIP14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 SPCS2Q15005 226 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 ZNF697Q5TEC3 545 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 KCTD7Q96MP8 289 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 SLITRK2Q9H156 845 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 EQTNQ9NQ60 294 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 CITO14578 2027 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 DNAJC25-GNG10A0A024R161 153 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 LDB2O43679 373 aa14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 CDKN1CP49918 316 aaPredicted RBP14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 TRIM71Q2Q1W2 868 aaKnown RBP14.59□□□□□ -0.07
ARHGEF40-207ENST00000556399 SHQ1Q6PI26 577 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms