RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 OR4K3Q96R72 315 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 CCNL2Q96S94 520 aaPredicted RBP9.25□□□□□ -0.93
SRP54-210ENST00000556380 PAFAH2Q99487 392 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 HIST1H2AJQ99878 128 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 H2AFJQ9BTM1 129 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 TRIM54Q9BYV2 358 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 UNKQ9C0B0 810 aaKnown RBP9.25□□□□□ -0.93
SRP54-210ENST00000556380 ATG10Q9H0Y0 220 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 PRORYQ9H606 182 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 FANCEQ9HB96 536 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 MRPS30Q9NP92 439 aaKnown RBP9.25□□□□□ -0.93
SRP54-210ENST00000556380 SNX15Q9NRS6 342 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 CUEDC1Q9NWM3 386 aaPredicted RBP9.25□□□□□ -0.93
SRP54-210ENST00000556380 ANKMY1Q9P2S6 941 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 TAC3Q9UHF0 121 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 ZNF180Q9UJW8 692 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 SH2B3Q9UQQ2 575 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 ACOT9Q9Y305 439 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 KALRNO60229 2985 aa9.25□□□□□ -0.93
SRP54-210ENST00000556380 ATMQ13315 3056 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 ANKRD12Q6UB98 2062 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 LOC105369274A0A096LPK9 316 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 LOC102723532A0A0G2JNH3 316 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 FITM1A5D6W6 292 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 H7BY64 318 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 TAPBPO15533 448 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 ZNF749O43361 778 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 SRPX2O60687 465 aaPredicted RBP9.24□□□□□ -0.93
SRP54-210ENST00000556380 OR2B3O76000 313 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 CCNDBP1O95273 360 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 GUCA1CO95843 209 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 MT-ND3P03897 115 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 CAPN1P07384 714 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 INHBAP08476 426 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 LIFP15018 202 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 DEKP35659 375 aaKnown RBP9.24□□□□□ -0.93
SRP54-210ENST00000556380 GGT5P36269 586 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 MSH2P43246 934 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 SLC6A12P48065 614 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 SERPINB9P50453 376 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 CSNK1G2P78368 415 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 GPS2Q13227 327 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 CSHL1Q14406 222 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 TGFBIQ15582 683 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 UAP1Q16222 522 aaPredicted RBP9.24□□□□□ -0.93
SRP54-210ENST00000556380 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.24□□□□□ -0.932e-6■■□□□ 13.9
SRP54-210ENST00000556380 COL28A1Q2UY09 1125 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 ZC3H12BQ5HYM0 836 aaKnown RBP9.24□□□□□ -0.93
SRP54-210ENST00000556380 PRAMEF13Q5VWM6 474 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 FRMPD2BQ6IN97 320 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 LCN10Q6JVE6 187 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 TLDC1Q6P9B6 456 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 LCTLQ6UWM7 567 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 CCDC91Q7Z6B0 441 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 DSELQ8IZU8 1212 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 OR4N4Q8N0Y3 316 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 CNPY4Q8N129 248 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 ABHD11Q8NFV4 315 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 OR4K1Q8NGD4 311 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 ATL1Q8WXF7 558 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 PYCR2Q96C36 320 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 RHBDF1Q96CC6 855 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 NXNL1Q96CM4 212 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 PRAP1Q96NZ9 151 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 OR2A5Q96R48 311 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 LHX9Q9NQ69 397 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 CCDC177Q9NQR7 707 aaPredicted RBP9.24□□□□□ -0.93
SRP54-210ENST00000556380 PCMTD2Q9NV79 361 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 TMEM184CQ9NVA4 438 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 UTP6Q9NYH9 597 aaKnown RBP9.24□□□□□ -0.93
SRP54-210ENST00000556380 FETUBQ9UGM5 382 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 IL17BQ9UHF5 180 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 PADI1Q9ULC6 663 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 SNX7Q9UNH6 387 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 AP1M2Q9Y6Q5 423 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 PCM1Q15154 2024 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 HEATR5BQ9P2D3 2071 aa9.24□□□□□ -0.93
SRP54-210ENST00000556380 KCNE1BA0A087WTH5 132 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 A0A087X1B8 175 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 A0A096LPK6 155 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 CCDC189A1A4V9 331 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 E7EQ34 232 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 POC1B-GALNT4F8VUJ3 575 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 H0YGG7 62 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 K7ENP7 123 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 MEN1O00255 615 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 CPNE3O75131 537 aaKnown RBP9.23□□□□□ -0.93
SRP54-210ENST00000556380 RFPL1O75677 317 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 KLHL2O95198 593 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 MED26O95402 600 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 ONECUT2O95948 504 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 ANXA5P08758 320 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 LTA4HP09960 611 aaKnown RBP9.23□□□□□ -0.93
SRP54-210ENST00000556380 MTHFD2P13995 350 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 CCND1P24385 295 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 HRH2P25021 359 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 CNTFP26441 200 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 TYK2P29597 1187 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 HNMTP50135 292 aa9.23□□□□□ -0.93
SRP54-210ENST00000556380 SERPINB8P50452 374 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms