RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 OR2T29Q8NH02 315 aa14.39□□□□□ -0.11
NEK9-209ENST00000556170 BBS4Q96RK4 519 aa14.39□□□□□ -0.11
NEK9-209ENST00000556170 CCDC177Q9NQR7 707 aaPredicted RBP14.39□□□□□ -0.11
NEK9-209ENST00000556170 ACSL6Q9UKU0 697 aa14.39□□□□□ -0.11
NEK9-209ENST00000556170 CNOT11Q9UKZ1 510 aaKnown RBP14.39□□□□□ -0.11
NEK9-209ENST00000556170 M0QX08 132 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 TNFRSF11BO00300 401 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 PRNPP04156 253 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 SDC1P18827 310 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 PDHA2P29803 388 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 COQ5Q5HYK3 327 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 ANKRD34AQ69YU3 496 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 HSH2DQ96JZ2 352 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 ZNF583Q96ND8 569 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 KCNC2Q96PR1 638 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 VPS35Q96QK1 796 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 ZSCAN5AQ9BUG6 496 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 VN1R3Q9BXE9 311 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 EPB41L1Q9H4G0 881 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 DDX28Q9NUL7 540 aaKnown RBP14.38□□□□□ -0.11
NEK9-209ENST00000556170 DAPK2Q9UIK4 370 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 BRCA1P38398 1863 aaKnown RBP14.38□□□□□ -0.11
NEK9-209ENST00000556170 IFNA14P01570 189 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 SLC35G4P0C7Q5 338 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 CBSLP0DN79 551 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 CBSP35520 551 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 WDR5P61964 334 aaKnown RBP14.38□□□□□ -0.11
NEK9-209ENST00000556170 DUOXA1Q1HG43 343 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 NHSL2Q5HYW2 709 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.38□□□□□ -0.11
NEK9-209ENST00000556170 DEF8Q6ZN54 512 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 NCCRP1Q6ZVX7 275 aaPredicted RBP14.38□□□□□ -0.11
NEK9-209ENST00000556170 PDPRQ8NCN5 879 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 STARD8Q92502 1023 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 GLYATL1Q969I3 302 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 CMTM7Q96FZ5 175 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 PPP1R16AQ96I34 528 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 FERD3LQ96RJ6 166 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 WDR37Q9Y2I8 494 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 GPSM3Q9Y4H4 160 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 INSL6Q9Y581 213 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 VILLO15195 856 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 NPPAP01160 153 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 EPCAMP16422 314 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 TRAF7Q6Q0C0 670 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.38□□□□□ -0.11
NEK9-209ENST00000556170 ZSWIM9Q86XI8 627 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 KRT78Q8N1N4 520 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.38□□□□□ -0.11
NEK9-209ENST00000556170 TRMT2BQ96GJ1 504 aaKnown RBP14.38□□□□□ -0.11
NEK9-209ENST00000556170 ZNF641Q96N77 438 aaPredicted RBP14.38□□□□□ -0.11
NEK9-209ENST00000556170 CCM2Q9BSQ5 444 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 SEZ6LQ9BYH1 1024 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 NAA50Q9GZZ1 169 aaKnown RBP14.38□□□□□ -0.11
NEK9-209ENST00000556170 P2RY12Q9H244 342 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 ITGB1BP2Q9UKP3 347 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 UTS2RQ9UKP6 389 aa14.38□□□□□ -0.11
NEK9-209ENST00000556170 BOLA2-SMG1P6H3BVE0 249 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 IFNA8P32881 189 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 S100A5P33763 92 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 ASMTP46597 345 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 CLDN8P56748 225 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 TAS2R50P59544 299 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 ANXA8L1Q5VT79 327 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 TRIM40Q6P9F5 258 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 PSRC1Q6PGN9 363 aaPredicted RBP14.37□□□□□ -0.11
NEK9-209ENST00000556170 DSG4Q86SJ6 1040 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 SLCO6A1Q86UG4 719 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 REM2Q8IYK8 340 aaPredicted RBP14.37□□□□□ -0.11
NEK9-209ENST00000556170 PROX1Q92786 737 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 KCNH6Q9H252 994 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 RETREG1Q9H6L5 497 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 HEBP1Q9NRV9 189 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 RHCGQ9UBD6 479 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 OTOFQ9HC10 1997 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 RTCAO00442 366 aaKnown RBP14.37□□□□□ -0.11
NEK9-209ENST00000556170 CNOT3O75175 753 aaKnown RBP14.37□□□□□ -0.11
NEK9-209ENST00000556170 AGXTP21549 392 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 JAK1P23458 1154 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 GRK3P35626 688 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 PRMT2P55345 433 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 RFX4Q33E94 735 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 ZNF614Q8N883 585 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 TERB1Q8NA31 727 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 GPATCH1Q9BRR8 931 aaKnown RBP14.37□□□□□ -0.11
NEK9-209ENST00000556170 SLC12A9Q9BXP2 914 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 TIMMDC1Q9NPL8 285 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 CLCA2Q9UQC9 943 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 PNMA8CA0A1B0GUJ8 204 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 CD160O95971 181 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 CHRM5P08912 532 aaPredicted RBP14.37□□□□□ -0.11
NEK9-209ENST00000556170 CTSAP10619 480 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 ADH5P11766 374 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 HRH2P25021 359 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 CA5AP35218 305 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 ERVFC1P60507 584 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 MRPS15P82914 257 aaKnown RBP14.37□□□□□ -0.11
NEK9-209ENST00000556170 CCSMST1Q4G0I0 132 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 CATSPEREQ5SY80 951 aa14.37□□□□□ -0.11
NEK9-209ENST00000556170 NEK5Q6P3R8 708 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms