RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 C1orf146Q5VVC0 180 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 IL23RQ5VWK5 629 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 PCSK4Q6UW60 755 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 ZNF517Q6ZMY9 492 aaPredicted RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 DCDC5Q6ZRR9 648 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 PCGF5Q86SE9 256 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 TRAPPC5Q8IUR0 188 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 LRRC56Q8IYG6 542 aaPredicted RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 ULK2Q8IYT8 1036 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 ADGRF3Q8IZF5 1079 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 LSMEM2Q8N112 164 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 TAB3Q8N5C8 712 aaPredicted RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 C2CD4AQ8NCU7 369 aaPredicted RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 LSM14AQ8ND56 463 aaKnown RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 WDR36Q8NI36 951 aaKnown RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 TRPC4APQ8TEL6 797 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 RSC1A1Q92681 617 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 MTBPQ96DY7 904 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 NRTNQ99748 197 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 EBNA1BP2Q99848 306 aaKnown RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 SH3GL1Q99961 368 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 CCDC77Q9BR77 488 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 GPATCH1Q9BRR8 931 aaKnown RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 MRPL1Q9BYD6 325 aaKnown RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 NDEL1Q9GZM8 345 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 CCDC86Q9H6F5 360 aaKnown RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 FBXO6Q9NRD1 293 aaPredicted RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 CATSPERZQ9NTU4 200 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 INTS10Q9NVR2 710 aaKnown RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 QPCTLQ9NXS2 382 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 KCNK4Q9NYG8 393 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 GALPQ9UBC7 116 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 ADAMTS6Q9UKP5 1117 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 RABL2BQ9UNT1 228 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 ICKQ9UPZ9 632 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 CARD8Q9Y2G2 431 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 MTO1Q9Y2Z2 717 aaKnown RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 A0A0G2JND7 137 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 OR5K3A6NET4 321 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 RHPN2P1A8MT19 583 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 FAM47E-STBD1D6RA91 191 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 PEX1O43933 1283 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 CNOT3O75175 753 aaKnown RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 TNFAIP8O95379 198 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 EIF2S1P05198 315 aaKnown RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 TFPTP0C1Z6 253 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 ATP6V1B1P15313 513 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 PGAM1P18669 254 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 ENDOUP21128 410 aaKnown RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 RPL10P27635 214 aaKnown RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 PEX2P28328 305 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 TTPAP49638 278 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 CDK9P50750 372 aaKnown RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 SESN2P58004 480 aaPredicted RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 GABREP78334 506 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 KCNC4Q03721 635 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 CYP4F3Q08477 520 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 GTF2H3Q13889 308 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 TLR1Q15399 786 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 INSCQ1MX18 579 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 DNAL1Q4LDG9 190 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 CYHR1Q6ZMK1 362 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 NEK10Q6ZWH5 1172 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 DET1Q7L5Y6 550 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 RELL1Q8IUW5 271 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 D2HGDHQ8N465 521 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 ARHGEF39Q8N4T4 335 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 Q8N9G6 341 aaPredicted RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 DNAAF3Q8N9W5 541 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 FBXO15Q8NCQ5 510 aaPredicted RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 ICA1LQ8NDH6 482 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 RBM15BQ8NDT2 890 aaKnown RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 OR5K2Q8NHB8 316 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 NACC2Q96BF6 587 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 EFHD2Q96C19 240 aaPredicted RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 LRRC39Q96DD0 335 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 CLPTM1LQ96KA5 538 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 ZNF285Q96NJ3 590 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 CD180Q99467 661 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 SLC30A3Q99726 388 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 THTPAQ9BU02 230 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 TRIM55Q9BYV6 548 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 DPH1Q9BZG8 443 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 ABCG4Q9H172 646 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 MVB12BQ9H7P6 319 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 KCNK13Q9HB14 408 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 PARVBQ9HBI1 364 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 TBC1D23Q9NUY8 699 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 BFARQ9NZS9 450 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 FOXJ2Q9P0K8 574 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 RSL24D1Q9UHA3 163 aaKnown RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 CRLS1Q9UJA2 301 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 POMT2Q9UKY4 750 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 BTRCQ9Y297 605 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 LOXL2Q9Y4K0 774 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 TMEM184BQ9Y519 407 aaPredicted RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 N6AMT1Q9Y5N5 214 aa3.78□□□□□ -1.8
LINC00648-202ENST00000555985 HEMK1Q9Y5R4 338 aaPredicted RBP3.78□□□□□ -1.8
LINC00648-202ENST00000555985 HEBP2Q9Y5Z4 205 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms