RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 HNF4AP41235 474 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 KRT6CP48668 564 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 UBAP2LQ14157 1087 aaKnown RBP9.82□□□□□ -0.84
SRP54-208ENST00000555557 E2F2Q14209 437 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 RBBP5Q15291 538 aaKnown RBP9.82□□□□□ -0.84
SRP54-208ENST00000555557 GALNTL6Q49A17 601 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 XKR7Q5GH72 579 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 LARP4Q71RC2 724 aaKnown RBP eCLIP9.82□□□□□ -0.84
SRP54-208ENST00000555557 RBM12BQ8IXT5 1001 aaKnown RBP9.82□□□□□ -0.84
SRP54-208ENST00000555557 ARL10Q8N8L6 244 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 ABHD11Q8NFV4 315 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 OR7G3Q8NG95 312 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 CEP70Q8NHQ1 597 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 FLVCR1-AS1Q8TAF5 88 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 WDR20Q8TBZ3 569 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 ERP27Q96DN0 273 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 WDR34Q96EX3 536 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 LRRC37BQ96QE4 947 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 PLCD4Q9BRC7 762 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 DPH7Q9BTV6 452 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 SLC29A3Q9BZD2 475 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 MYLK2Q9H1R3 596 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 EHD1Q9H4M9 534 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 SLC6A20Q9NP91 592 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 LRIT1Q9P2V4 623 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 RAB23Q9ULC3 237 aa9.82□□□□□ -0.84
SRP54-208ENST00000555557 GOLGA4Q13439 2230 aaKnown RBP9.81□□□□□ -0.84
SRP54-208ENST00000555557 ADAMTS9Q9P2N4 1935 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 RHPN2P1A8MT19 583 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 MAGEB17A8MXT2 336 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 EBAG9O00559 213 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 FCHO1O14526 889 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 LCMT2O60294 686 aaKnown RBP9.81□□□□□ -0.84
SRP54-208ENST00000555557 PRAMEF10O60809 474 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 UBXN7O94888 489 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 SYPP08247 313 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 AMD1P17707 334 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 GRIA3P42263 894 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 DPP6P42658 865 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 LSSP48449 732 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 PPM1FP49593 454 aaPredicted RBP9.81□□□□□ -0.84
SRP54-208ENST00000555557 CCR8P51685 355 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 CSNK1G2P78368 415 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 TCF15Q12870 199 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 NKAIN2Q5VXU1 208 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 MED27Q6P2C8 311 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 C6orf89Q6UWU4 347 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 TRPM8Q7Z2W7 1104 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 EFL1Q7Z2Z2 1120 aaKnown RBP9.81□□□□□ -0.84
SRP54-208ENST00000555557 HUS1BQ8NHY5 278 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 ACTRT2Q8TDY3 377 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 FAM122AQ96E09 287 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 LOXL4Q96JB6 756 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 CATSPER2Q96P56 530 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 EFCAB11Q9BUY7 163 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 ACPTQ9BZG2 426 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 NLGN3Q9NZ94 848 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 CCL27Q9Y4X3 112 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 PCDHGA11Q9Y5H2 935 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 TP53BP1Q12888 1972 aaPredicted RBP9.81□□□□□ -0.84
SRP54-208ENST00000555557 PCM1Q15154 2024 aa9.81□□□□□ -0.84
SRP54-208ENST00000555557 ARID1BQ8NFD5 2236 aaPredicted RBP9.81□□□□□ -0.84
SRP54-208ENST00000555557 OR5K3A6NET4 321 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 C2orf74A8MZ97 194 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 HAT1O14929 419 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 KHNYNO15037 678 aaKnown RBP9.8□□□□□ -0.84
SRP54-208ENST00000555557 SIGLEC6O43699 453 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 DCTN3O75935 186 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 ETHE1O95571 254 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 CER1O95813 267 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 SERPINA6P08185 405 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 ALDOCP09972 364 aaKnown RBP9.8□□□□□ -0.84
SRP54-208ENST00000555557 PVRP15151 417 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 CD1EP15812 388 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 MAGP20916 626 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 CMPK1P30085 196 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 CCT8P50990 548 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 NUBP1P53384 320 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 OR1D5P58170 312 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 CYP4F2P78329 520 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 KIR2DS3Q14952 304 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 NR6A1Q15406 480 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 HIST2H2ACQ16777 129 aaPredicted RBP9.8□□□□□ -0.84
SRP54-208ENST00000555557 IMPG1Q17R60 797 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 PAGE2BQ5JRK9 111 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 HIST2H2AA3Q6FI13 130 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 TMIGD1Q6UXZ0 262 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 TRIM46Q7Z4K8 759 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 OOSP2Q86WS3 158 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 MINDY1Q8N5J2 469 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 EID2Q8N6I1 236 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 Q8N9G6 341 aaPredicted RBP9.8□□□□□ -0.84
SRP54-208ENST00000555557 ANKRD53Q8N9V6 530 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 OR4K1Q8NGD4 311 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 SLC22A18Q96BI1 424 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 MAGEB10Q96LZ2 347 aaPredicted RBP9.8□□□□□ -0.84
SRP54-208ENST00000555557 FCRL4Q96PJ5 515 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 AIF1LQ9BQI0 150 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 CCDC28BQ9BUN5 200 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 TWSG1Q9GZX9 223 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms