RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 PTGES3LE9PB15 166 aa2.11□□□□□ -2.07
SRP54-207ENST00000555535 CTDSP2O14595 271 aa2.11□□□□□ -2.07
SRP54-207ENST00000555535 PTP4A3O75365 173 aa2.11□□□□□ -2.07
SRP54-207ENST00000555535 HMGB1P09429 215 aaKnown RBP2.11□□□□□ -2.07
SRP54-207ENST00000555535 FDPSP14324 419 aaKnown RBP2.11□□□□□ -2.07
SRP54-207ENST00000555535 GJA1P17302 382 aa2.11□□□□□ -2.07
SRP54-207ENST00000555535 NDUFV3P56181 108 aaKnown RBP2.11□□□□□ -2.07
SRP54-207ENST00000555535 KLC1Q07866 573 aa2.11□□□□□ -2.07
SRP54-207ENST00000555535 TRIM29Q14134 588 aa2.11□□□□□ -2.07
SRP54-207ENST00000555535 PHKG1Q16816 387 aa2.11□□□□□ -2.07
SRP54-207ENST00000555535 KRT79Q5XKE5 535 aa2.11□□□□□ -2.07
SRP54-207ENST00000555535 IL17RELQ6ZVW7 336 aa2.11□□□□□ -2.07
SRP54-207ENST00000555535 KBTBD6Q86V97 674 aa2.11□□□□□ -2.07
SRP54-207ENST00000555535 RNF130Q86XS8 419 aa2.11□□□□□ -2.07
SRP54-207ENST00000555535 FAM89BQ8N5H3 189 aa2.11□□□□□ -2.07
SRP54-207ENST00000555535 OR52B6Q8NGF0 335 aa2.11□□□□□ -2.07
SRP54-207ENST00000555535 CCDC34Q96HJ3 373 aa2.11□□□□□ -2.07
SRP54-207ENST00000555535 UBAC1Q9BSL1 405 aa2.11□□□□□ -2.07
SRP54-207ENST00000555535 YTHDF1Q9BYJ9 559 aaKnown RBP2.11□□□□□ -2.07
SRP54-207ENST00000555535 Q9H8V8 135 aa2.11□□□□□ -2.07
SRP54-207ENST00000555535 MYNNQ9NPC7 610 aa2.11□□□□□ -2.07
SRP54-207ENST00000555535 DPP3Q9NY33 737 aa2.11□□□□□ -2.07
SRP54-207ENST00000555535 ABT1Q9ULW3 272 aaKnown RBP2.11□□□□□ -2.07
SRP54-207ENST00000555535 CHKBQ9Y259 395 aa2.11□□□□□ -2.07
SRP54-207ENST00000555535 LOC102723996A0A087X1L8 192 aa2.1□□□□□ -2.07
SRP54-207ENST00000555535 NEMP2A6NFY4 417 aa2.1□□□□□ -2.07
SRP54-207ENST00000555535 B4DLN1 442 aa2.1□□□□□ -2.07
SRP54-207ENST00000555535 J3KRW8 73 aa2.1□□□□□ -2.07
SRP54-207ENST00000555535 OGTO15294 1046 aa2.1□□□□□ -2.07
SRP54-207ENST00000555535 ERAL1O75616 437 aaKnown RBP2.1□□□□□ -2.07
SRP54-207ENST00000555535 LY6G6DO95868 133 aa2.1□□□□□ -2.07
SRP54-207ENST00000555535 RENP00797 406 aa2.1□□□□□ -2.07
SRP54-207ENST00000555535 VAMP7P51809 220 aa2.1□□□□□ -2.07
SRP54-207ENST00000555535 MRPL12P52815 198 aaKnown RBP2.1□□□□□ -2.07
SRP54-207ENST00000555535 MAPK12P53778 367 aa2.1□□□□□ -2.07
SRP54-207ENST00000555535 MCMDC2Q4G0Z9 681 aa2.1□□□□□ -2.07
SRP54-207ENST00000555535 FCRLAQ7L513 359 aa2.1□□□□□ -2.07
SRP54-207ENST00000555535 TDRD5Q8NAT2 981 aaKnown RBP2.1□□□□□ -2.07
SRP54-207ENST00000555535 OR4K1Q8NGD4 311 aa2.1□□□□□ -2.07
SRP54-207ENST00000555535 FAM71F1Q96KD3 344 aaPredicted RBP2.1□□□□□ -2.07
SRP54-207ENST00000555535 SFXN2Q96NB2 322 aa2.1□□□□□ -2.07
SRP54-207ENST00000555535 DNAI2Q9GZS0 605 aa2.1□□□□□ -2.07
SRP54-207ENST00000555535 ZMYND12Q9H0C1 365 aa2.1□□□□□ -2.07
SRP54-207ENST00000555535 UNC45AQ9H3U1 944 aa2.1□□□□□ -2.07
SRP54-207ENST00000555535 EGLN3Q9H6Z9 239 aa2.1□□□□□ -2.07
SRP54-207ENST00000555535 SLC35C2Q9NQQ7 365 aa2.1□□□□□ -2.07
SRP54-207ENST00000555535 EIF2B3Q9NR50 452 aaKnown RBP2.1□□□□□ -2.07
SRP54-207ENST00000555535 PRDM4Q9UKN5 801 aa2.1□□□□□ -2.07
SRP54-207ENST00000555535 SELENOKQ9Y6D0 94 aa2.1□□□□□ -2.07
SRP54-207ENST00000555535 GPR75-ASB3A0A0A6YYF3 556 aa2.09□□□□□ -2.07
SRP54-207ENST00000555535 FAM168BA1KXE4 195 aa2.09□□□□□ -2.07
SRP54-207ENST00000555535 TRIM49BA6NDI0 452 aa2.09□□□□□ -2.07
SRP54-207ENST00000555535 CCL24O00175 119 aa2.09□□□□□ -2.07
SRP54-207ENST00000555535 TRAFD1O14545 582 aaPredicted RBP2.09□□□□□ -2.07
SRP54-207ENST00000555535 CDX4O14627 284 aaPredicted RBP2.09□□□□□ -2.07
SRP54-207ENST00000555535 SURF4O15260 269 aa2.09□□□□□ -2.07
SRP54-207ENST00000555535 EDNRAP25101 427 aa2.09□□□□□ -2.07
SRP54-207ENST00000555535 ALDH1B1P30837 517 aa2.09□□□□□ -2.07
SRP54-207ENST00000555535 SRSF9Q13242 221 aaKnown RBP eCLIP2.09□□□□□ -2.07
SRP54-207ENST00000555535 SGCGQ13326 291 aa2.09□□□□□ -2.07
SRP54-207ENST00000555535 VEZF1Q14119 521 aa2.09□□□□□ -2.07
SRP54-207ENST00000555535 ATAD3CQ5T2N8 411 aa2.09□□□□□ -2.07
SRP54-207ENST00000555535 C9orf66Q5T8R8 295 aa2.09□□□□□ -2.07
SRP54-207ENST00000555535 AGAP7PQ5VUJ5 663 aa2.09□□□□□ -2.07
SRP54-207ENST00000555535 GUF1Q8N442 669 aaKnown RBP2.09□□□□□ -2.07
SRP54-207ENST00000555535 C4orf32Q8N8J7 132 aa2.09□□□□□ -2.07
SRP54-207ENST00000555535 C1orf131Q8NDD1 294 aaKnown RBP2.09□□□□□ -2.07
SRP54-207ENST00000555535 SPPL2AQ8TCT8 520 aa2.09□□□□□ -2.07
SRP54-207ENST00000555535 AGAP11Q8TF27 550 aa2.09□□□□□ -2.07
SRP54-207ENST00000555535 PIK3R3Q92569 461 aa2.09□□□□□ -2.07
SRP54-207ENST00000555535 SLAMF9Q96A28 289 aa2.09□□□□□ -2.07
SRP54-207ENST00000555535 TEX13BQ9BXU2 312 aa2.09□□□□□ -2.07
SRP54-207ENST00000555535 OSGEPL1Q9H4B0 414 aa2.09□□□□□ -2.07
SRP54-207ENST00000555535 ASB8Q9H765 288 aa2.09□□□□□ -2.07
SRP54-207ENST00000555535 PSD3Q9NYI0 1048 aa2.09□□□□□ -2.07
SRP54-207ENST00000555535 PTRH2Q9Y3E5 179 aaKnown RBP2.09□□□□□ -2.07
SRP54-207ENST00000555535 NAALAD2Q9Y3Q0 740 aa2.09□□□□□ -2.07
SRP54-207ENST00000555535 FAM205AQ6ZU69 1335 aa2.09□□□□□ -2.08
SRP54-207ENST00000555535 RALGAPA1Q6GYQ0 2036 aa2.08□□□□□ -2.08
SRP54-207ENST00000555535 A0A1W2PPQ1 181 aa2.08□□□□□ -2.08
SRP54-207ENST00000555535 ARHGEF33A8MVX0 844 aa2.08□□□□□ -2.08
SRP54-207ENST00000555535 C2CD4DB7Z1M9 353 aa2.08□□□□□ -2.08
SRP54-207ENST00000555535 VILLO15195 856 aa2.08□□□□□ -2.08
SRP54-207ENST00000555535 SH3BGRLO75368 114 aa2.08□□□□□ -2.08
SRP54-207ENST00000555535 CHRNA3P32297 505 aa2.08□□□□□ -2.08
SRP54-207ENST00000555535 PSMB10P40306 273 aa2.08□□□□□ -2.08
SRP54-207ENST00000555535 NDST2P52849 883 aa2.08□□□□□ -2.08
SRP54-207ENST00000555535 DCDC1P59894 354 aa2.08□□□□□ -2.08
SRP54-207ENST00000555535 TRAP1Q12931 704 aaKnown RBP2.08□□□□□ -2.08
SRP54-207ENST00000555535 SIX1Q15475 284 aaPredicted RBP2.08□□□□□ -2.08
SRP54-207ENST00000555535 ZNF79Q15937 498 aa2.08□□□□□ -2.08
SRP54-207ENST00000555535 Q1RN00 199 aa2.08□□□□□ -2.08
SRP54-207ENST00000555535 ALDH1L2Q3SY69 923 aa2.08□□□□□ -2.08
SRP54-207ENST00000555535 C2orf83Q53S99 150 aa2.08□□□□□ -2.08
SRP54-207ENST00000555535 HERC4Q5GLZ8 1057 aaPredicted RBP2.08□□□□□ -2.08
SRP54-207ENST00000555535 JAKMIP3Q5VZ66 844 aa2.08□□□□□ -2.08
SRP54-207ENST00000555535 LEMD1Q68G75 181 aa2.08□□□□□ -2.08
SRP54-207ENST00000555535 OR4A47Q6IF82 309 aa2.08□□□□□ -2.08
SRP54-207ENST00000555535 MFSD12Q6NUT3 480 aa2.08□□□□□ -2.08
SRP54-207ENST00000555535 MORC4Q8TE76 937 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms