RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 HYKKA2RU49 373 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 CTAGE15A4D2H0 777 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 C9J4A7 227 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 MASP2O00187 686 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 DSCR3O14972 297 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 ONECUT2O95948 504 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 UMODP07911 640 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 CTAGE8P0CG41 777 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 NPPBP16860 134 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 GP5P40197 560 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 CSNK1G2P78368 415 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 ABATP80404 500 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 POU4F1Q01851 419 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 NFATC3Q12968 1075 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 USP10Q14694 798 aaKnown RBP13.05□□□□□ -0.32
SNX6-203ENST00000555416 TSNQ15631 228 aaKnown RBP13.05□□□□□ -0.32
SNX6-203ENST00000555416 VN1R4Q7Z5H5 301 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 ADCK2Q7Z695 626 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 CTAGE6Q86UF2 777 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 CTAGE4Q8IX94 777 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 CTAGE3PQ8IX95 158 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 OR56A3Q8NH54 315 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 FBXL8Q96CD0 374 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 ABHD17AQ96GS6 310 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 MACROD1Q9BQ69 325 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 MESP1Q9BRJ9 268 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 NINJ2Q9NZG7 142 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 ANKMY1Q9P2S6 941 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 CTSFQ9UBX1 484 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 MAN2B2Q9Y2E5 1009 aa13.05□□□□□ -0.32
SNX6-203ENST00000555416 FEZF1A0PJY2 475 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 HMX2A2RU54 273 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 FFAR3O14843 346 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 GPR42O15529 346 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 LCMT2O60294 686 aaKnown RBP13.04□□□□□ -0.32
SNX6-203ENST00000555416 CCNDBP1O95273 360 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 PDGFAP04085 211 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 CDH1P12830 882 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 EZRP15311 586 aaKnown RBP13.04□□□□□ -0.32
SNX6-203ENST00000555416 PMS2P54278 862 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 ARSFP54793 590 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 C19orf57Q0VDD7 668 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 DLG1Q12959 904 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 ATP1A4Q13733 1029 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 ZKSCAN8Q15776 578 aaPredicted RBP13.04□□□□□ -0.32
SNX6-203ENST00000555416 COLEC12Q5KU26 742 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 SHISA6Q6ZSJ9 500 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 CMC1Q7Z7K0 106 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 NKAPQ8N5F7 415 aaKnown RBP13.04□□□□□ -0.32
SNX6-203ENST00000555416 CSNK1A1LQ8N752 337 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 TTC29Q8NA56 475 aaPredicted RBP13.04□□□□□ -0.32
SNX6-203ENST00000555416 MNS1Q8NEH6 495 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 KIF18AQ8NI77 898 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 IFT81Q8WYA0 676 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 CDKL2Q92772 493 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 MRRFQ96E11 262 aaKnown RBP13.04□□□□□ -0.32
SNX6-203ENST00000555416 SPNS1Q9H2V7 528 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 POPDC3Q9HBV1 291 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 GPAMQ9HCL2 828 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 ZNF71Q9NQZ8 489 aaPredicted RBP13.04□□□□□ -0.32
SNX6-203ENST00000555416 TMEM184CQ9NVA4 438 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 TLK1Q9UKI8 766 aa13.04□□□□□ -0.32
SNX6-203ENST00000555416 NOVA2Q9UNW9 492 aaKnown RBP13.04□□□□□ -0.32
SNX6-203ENST00000555416 PTRH2Q9Y3E5 179 aaKnown RBP13.04□□□□□ -0.32
SNX6-203ENST00000555416 SPTA1P02549 2419 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 ARGFXA6NJG6 315 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 KIF2AO00139 706 aaPredicted RBP13.03□□□□□ -0.32
SNX6-203ENST00000555416 FOXS1O43638 330 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 TUBB4AP04350 444 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 HIST1H2AGP0C0S8 130 aaPredicted RBP13.03□□□□□ -0.32
SNX6-203ENST00000555416 CCDC166P0CW27 439 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 HIST1H2ADP20671 130 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 OTX2P32243 289 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 STX2P32856 288 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 BCL6P41182 706 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 KCNC1P48547 511 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 AP1S2P56377 157 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 MEF2AQ02078 507 aaPredicted RBP13.03□□□□□ -0.32
SNX6-203ENST00000555416 RELAQ04206 551 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 NAA25Q14CX7 972 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 CATSPEREQ5SY80 951 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 LCTLQ6UWM7 567 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 OVCH1Q7RTY7 1134 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 C17orf64Q86WR6 236 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 PTRH1Q86Y79 214 aaKnown RBP13.03□□□□□ -0.32
SNX6-203ENST00000555416 ZNF740Q8NDX6 193 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 OR2Y1Q8NGV0 311 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 THAP4Q8WY91 577 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 PTERQ96BW5 349 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 TRIM44Q96DX7 344 aaPredicted RBP13.03□□□□□ -0.32
SNX6-203ENST00000555416 HIST1H2AHQ96KK5 128 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 SPSB2Q99619 263 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 HIST1H2AJQ99878 128 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 H2AFJQ9BTM1 129 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 DHRS4Q9BTZ2 278 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 FAM117AQ9C073 453 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 DERL2Q9GZP9 239 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 SLC25A18Q9H1K4 315 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 ADNPQ9H2P0 1102 aa13.03□□□□□ -0.32
SNX6-203ENST00000555416 CTNNAL1Q9UBT7 734 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms