RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 MYO1HQ8N1T3 1032 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 AFAP1L2Q8N4X5 818 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 OR5K2Q8NHB8 316 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 FBXO27Q8NI29 283 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 ZDHHC16Q969W1 377 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 RNF31Q96EP0 1072 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 CCDC74BQ96LY2 380 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 DEPDC7Q96QD5 511 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 HRASLS2Q9NWW9 162 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 NDE1Q9NXR1 346 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 CPSF2Q9P2I0 782 aaKnown RBP9.53□□□□□ -0.88
PSEN1-213ENST00000555386 XPR1Q9UBH6 696 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 ICKQ9UPZ9 632 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 COL27A1Q8IZC6 1860 aaPredicted RBP9.53□□□□□ -0.88
PSEN1-213ENST00000555386 CELSR3Q9NYQ7 3312 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 IGHV5-10-1A0A0J9YXX1 117 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 ARHGEF33A8MVX0 844 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 BTN3A1O00481 513 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 NTN3O00634 580 aaPredicted RBP9.53□□□□□ -0.88
PSEN1-213ENST00000555386 KIF1CO43896 1103 aaKnown RBP9.53□□□□□ -0.88
PSEN1-213ENST00000555386 DKK1O94907 266 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 C1orf105O95561 183 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 CATP04040 527 aaKnown RBP9.53□□□□□ -0.88
PSEN1-213ENST00000555386 RPN2P04844 631 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 ADRB1P08588 477 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 LTA4HP09960 611 aaKnown RBP9.53□□□□□ -0.88
PSEN1-213ENST00000555386 CDK4P11802 303 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 HGFP14210 728 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 MAP4P27816 1152 aaKnown RBP9.53□□□□□ -0.88
PSEN1-213ENST00000555386 EPHA4P54764 986 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 NAGLUP54802 743 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 INHBCP55103 352 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 GPLD1P80108 840 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 GBX1Q14549 363 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 NR1D2Q14995 579 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 ACAP2Q15057 778 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 SLC9B1Q4ZJI4 515 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 C3orf38Q5JPI3 329 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 VWA5B1Q5TIE3 1220 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 TMEM207Q6UWW9 146 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 UNC5DQ6UXZ4 953 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 AMIGO1Q86WK6 493 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 OOSP2Q86WS3 158 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 TMPRSS12Q86WS5 348 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 SLC22A9Q8IVM8 553 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 APLFQ8IW19 511 aaPredicted RBP9.53□□□□□ -0.88
PSEN1-213ENST00000555386 DCUN1D3Q8IWE4 304 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 GALNT15Q8N3T1 639 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 RP9Q8TA86 221 aaKnown RBP9.53□□□□□ -0.88
PSEN1-213ENST00000555386 NXNL1Q96CM4 212 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 PPM1MQ96MI6 270 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 KLHL25Q9H0H3 589 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 EML4Q9HC35 981 aaKnown RBP9.53□□□□□ -0.88
PSEN1-213ENST00000555386 NMRK1Q9NWW6 199 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 GEMIN8Q9NWZ8 242 aaKnown RBP9.53□□□□□ -0.88
PSEN1-213ENST00000555386 UTP6Q9NYH9 597 aaKnown RBP9.53□□□□□ -0.88
PSEN1-213ENST00000555386 POLG2Q9UHN1 485 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 ADAMTS6Q9UKP5 1117 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 PRPF19Q9UMS4 504 aaKnown RBP9.53□□□□□ -0.88
PSEN1-213ENST00000555386 LRCH1Q9Y2L9 728 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 HEATR5BQ9P2D3 2071 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 PMS2P1A4D2B8 440 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 PABPN1LA6NDY0 278 aaKnown RBP9.52□□□□□ -0.89
PSEN1-213ENST00000555386 NPEPPSL1A6NEC2 478 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 ISM1B1AKI9 464 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 BTN3A3O00478 584 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 ZBTB14O43829 449 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 CHRNGP07510 517 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 CCDC166P0CW27 439 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 MPC1LP0DKB6 136 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 CBSLP0DN79 551 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 ENO3P13929 434 aaPredicted RBP9.52□□□□□ -0.89
PSEN1-213ENST00000555386 ANPEPP15144 967 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 ITGAXP20702 1163 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 CBSP35520 551 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 CAPZBP47756 277 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 PDX1P52945 283 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 SLC25A3Q00325 362 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 DLG1Q12959 904 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 BLMHQ13867 455 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 ISXQ2M1V0 245 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 TECRLQ5HYJ1 363 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.52□□□□□ -0.89
PSEN1-213ENST00000555386 CACHD1Q5VU97 1274 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 CDCP2Q5VXM1 449 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 KLHL35Q6PF15 583 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 C16orf89Q6UX73 402 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 CYHR1Q6ZMK1 362 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 MBOAT1Q6ZNC8 495 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 TMPRSS7Q7RTY8 843 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 TRIM73Q86UV7 250 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 FAM129CQ86XR2 697 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 PLXDC1Q8IUK5 500 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 FAM20CQ8IXL6 584 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 LSMEM2Q8N112 164 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 WDR48Q8TAF3 677 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 ANKRD49Q8WVL7 239 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 EXT2Q93063 718 aa9.52□□□□□ -0.89
PSEN1-213ENST00000555386 MAELQ96JY0 434 aaKnown RBP9.52□□□□□ -0.89
PSEN1-213ENST00000555386 UBXN10Q96LJ8 280 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms