RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 FIS1Q9Y3D6 152 aa10.81□□□□□ -0.68
SRP54-205ENST00000554803 ZNF711Q9Y462 761 aa10.81□□□□□ -0.68
SRP54-205ENST00000554803 PCDHB1Q9Y5F3 818 aa10.81□□□□□ -0.68
SRP54-205ENST00000554803 OR51B4Q9Y5P0 310 aa10.81□□□□□ -0.68
SRP54-205ENST00000554803 ST14Q9Y5Y6 855 aa10.81□□□□□ -0.68
SRP54-205ENST00000554803 A0A1B0GVG6 124 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 ILVBLA1L0T0 632 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 CCDC162PA2VCL2 907 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 SUPT3HB4E1H0 165 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 H3BMM5 538 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 H7C0S8 307 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 ACOX3O15254 700 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 SYNCRIPO60506 623 aaKnown RBP10.8□□□□□ -0.68
SRP54-205ENST00000554803 SUPT3HO75486 399 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 NDUFS3O75489 264 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 WDR47O94967 919 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 FKBP9O95302 570 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 GOT2P00505 430 aaKnown RBP10.8□□□□□ -0.68
SRP54-205ENST00000554803 ESR1P03372 595 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 JAK1P23458 1154 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 EEF1DP29692 281 aaKnown RBP10.8□□□□□ -0.68
SRP54-205ENST00000554803 ALDH3A2P51648 485 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 POLR2JP52435 117 aaKnown RBP10.8□□□□□ -0.68
SRP54-205ENST00000554803 PLK1P53350 603 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 ERVPABLB-1P60509 514 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 SLC10A7Q0GE19 358 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 GK3PQ14409 553 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 PFKFB4Q16877 469 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 ATP6AP1LQ52LC2 224 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 ZC3H12BQ5HYM0 836 aaKnown RBP10.8□□□□□ -0.68
SRP54-205ENST00000554803 CDKL4Q5MAI5 379 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 MPP7Q5T2T1 576 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 CERS6Q6ZMG9 384 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 Q6ZNX1 250 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 GPRIN3Q6ZVF9 776 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 FRA10AC1Q70Z53 315 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 ADAMTSL2Q86TH1 951 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 ZFAND4Q86XD8 727 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 CACUL1Q86Y37 369 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 CLVS1Q8IUQ0 354 aaPredicted RBP10.8□□□□□ -0.68
SRP54-205ENST00000554803 EPHX4Q8IUS5 362 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 SPATA6LQ8N4H0 392 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 TTC30BQ8N4P2 665 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 ZNF557Q8N988 423 aaPredicted RBP10.8□□□□□ -0.68
SRP54-205ENST00000554803 SMYD1Q8NB12 490 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 MINDY2Q8NBR6 621 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 FIBINQ8TAL6 211 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 HDAC2Q92769 488 aaKnown RBP10.8□□□□□ -0.68
SRP54-205ENST00000554803 VPS33AQ96AX1 596 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 THAP11Q96EK4 314 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 PPP3R2Q96LZ3 170 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 PSKH2Q96QS6 385 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 MGME1Q9BQP7 344 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 ORAI3Q9BRQ5 295 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 SPON2Q9BUD6 331 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 NPLQ9BXD5 320 aaPredicted RBP10.8□□□□□ -0.68
SRP54-205ENST00000554803 MUC3BQ9H195 1237 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 MAGIXQ9H6Y5 334 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 GPN2Q9H9Y4 310 aaPredicted RBP10.8□□□□□ -0.68
SRP54-205ENST00000554803 PDFQ9HBH1 243 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 ABCB8Q9NUT2 735 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 TRMT6Q9UJA5 497 aaKnown RBP10.8□□□□□ -0.68
SRP54-205ENST00000554803 GNPTGQ9UJJ9 305 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 OAZ3Q9UMX2 235 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 AP1M2Q9Y6Q5 423 aa10.8□□□□□ -0.68
SRP54-205ENST00000554803 COL27A1Q8IZC6 1860 aaPredicted RBP10.8□□□□□ -0.68
SRP54-205ENST00000554803 DLGAP1O14490 977 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 AURKAO14965 403 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 INPP4BO15327 924 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 YKT6O15498 198 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 SEMA4FO95754 770 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 MT-CO3P00414 261 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 S100BP04271 92 aaPredicted RBP10.79□□□□□ -0.68
SRP54-205ENST00000554803 ANXA6P08133 673 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 CD1EP15812 388 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 CKMT2P17540 419 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 PCSK6P29122 969 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 EPHA8P29322 1005 aaPredicted RBP10.79□□□□□ -0.68
SRP54-205ENST00000554803 HLA-FP30511 346 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 PIK3CGP48736 1102 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 ZNF140P52738 457 aaPredicted RBP10.79□□□□□ -0.68
SRP54-205ENST00000554803 OXCT1P55809 520 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 C21orf59P57076 290 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 IL2P60568 153 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 RACK1P63244 317 aaKnown RBP10.79□□□□□ -0.68
SRP54-205ENST00000554803 DSC2Q02487 901 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 DAG1Q14118 895 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 PCBP2Q15366 365 aaKnown RBP eCLIP10.79□□□□□ -0.68
SRP54-205ENST00000554803 OR4D1Q15615 310 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 PLA2G4EQ3MJ16 856 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 VPS26BQ4G0F5 336 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 CYBRD1Q53TN4 286 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 ZNF789Q5FWF6 425 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 PRAMEF14Q5SWL7 426 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 LYPLAL1Q5VWZ2 237 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 ZNF549Q6P9A3 640 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 TMEM207Q6UWW9 146 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 LINGO4Q6UY18 593 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 ZNF783Q6ZMS7 281 aa10.79□□□□□ -0.68
SRP54-205ENST00000554803 SPPL2CQ8IUH8 684 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms