RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 PTCHD3Q3KNS1 767 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 CDKL4Q5MAI5 379 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 C1orf189Q5VU69 101 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 FRA10AC1Q70Z53 315 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 ADCK2Q7Z695 626 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 TBC1D1Q86TI0 1168 aaPredicted RBP12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 THOC6Q86W42 341 aaKnown RBP12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 C17orf64Q86WR6 236 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 PLD3Q8IV08 490 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 KLHDC8AQ8IYD2 350 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 CENPLQ8N0S6 344 aaPredicted RBP12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 ABHD11Q8NFV4 315 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 OR4K1Q8NGD4 311 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 STAG3L4Q8TBR4 150 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 ISL2Q96A47 359 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 GBP5Q96PP8 586 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 RUFY1Q96T51 708 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 EGFL8Q99944 293 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 HAUS8Q9BT25 410 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 GPR87Q9BY21 358 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 FAM117AQ9C073 453 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 SLC7A5P2Q9GIP4 190 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 NMRAL1Q9HBL8 299 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 IRAK4Q9NWZ3 460 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 DHCR7Q9UBM7 475 aaKnown RBP12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 KCND3Q9UK17 655 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 TLK1Q9UKI8 766 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 SRPK3Q9UPE1 567 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 SLC22A14Q9Y267 594 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 MRPS18BQ9Y676 258 aaKnown RBP12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 IKBKGQ9Y6K9 419 aa12.35□□□□□ -0.43
MTHFD1-208ENST00000554739 A0A096LPK6 155 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 EXOC1LA0A1B0GW35 172 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 HYKKA2RU49 373 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 NCF1BA6NI72 391 aaPredicted RBP12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 NCF1CA8MVU1 366 aaPredicted RBP12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 HAT1O14929 419 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 TAPBPO15533 448 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 KATNA1O75449 491 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 KRT38O76015 456 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 EIF2S1P05198 315 aaKnown RBP12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 LTA4HP09960 611 aaKnown RBP12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 RAB40ALP0C0E4 278 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 CDH1P12830 882 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 NCF1P14598 390 aaPredicted RBP12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 TFEBP19484 476 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 ITGAXP20702 1163 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 AGXTP21549 392 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 ALAS2P22557 587 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 CNTFP26441 200 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 PTPN4P29074 926 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 GDF5P43026 501 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 MAGEA12P43365 314 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 SLC6A12P48065 614 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 SERPINB8P50452 374 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 ARSFP54793 590 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 DCDP81605 110 aaKnown RBP12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 IRF9Q00978 393 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 PRTGQ2VWP7 1150 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 FAM214AQ32MH5 1076 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 C18orf21Q32NC0 220 aaPredicted RBP12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 CRTC2Q53ET0 693 aaPredicted RBP12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 YOD1Q5VVQ6 348 aaPredicted RBP12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 TTLL10Q6ZVT0 673 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 PROKR1Q8TCW9 393 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 KCTD4Q8WVF5 259 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 STARD8Q92502 1023 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 NXNL1Q96CM4 212 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 GPR78Q96P69 363 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 NLNQ9BYT8 704 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 ALG9Q9H6U8 611 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 CUTCQ9NTM9 273 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 RNF112Q9ULX5 631 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 FARSAQ9Y285 508 aaKnown RBP12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 CFAP46Q8IYW2 2715 aa12.34□□□□□ -0.43
MTHFD1-208ENST00000554739 ZNF891A8MT65 544 aaPredicted RBP12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 DSCR3O14972 297 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 LCMT2O60294 686 aaKnown RBP12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 KLHL2O95198 593 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 MED26O95402 600 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 ONECUT2O95948 504 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 RECKO95980 971 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 SPTBP11277 2137 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 CCR8P51685 355 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 EMP3P54852 163 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 RPS15P62841 145 aaKnown RBP12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 NFKB2Q00653 900 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 FAM83EQ2M2I3 478 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 NKAIN1Q4KMZ8 207 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 CATSPEREQ5SY80 951 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 SULT1C3Q6IMI6 304 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 ADGRD1Q6QNK2 874 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 FAM198BQ6UWH4 519 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 TCAIMQ8N3R3 496 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 ARHGEF39Q8N4T4 335 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 CSNK1A1LQ8N752 337 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 TTC29Q8NA56 475 aaPredicted RBP12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 RHEBL1Q8TAI7 183 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 SLC5A11Q8WWX8 675 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms