RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 NRSN1Q8IZ57 195 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 NDUFAF2Q8N183 169 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 LRRC57Q8N9N7 239 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 CCNYQ8ND76 341 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 ACRBPQ8NEB7 543 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 FAM46DQ8NEK8 389 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 EXD1Q8NHP7 514 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 POC1BQ8TC44 478 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 PATE1Q8WXA2 126 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 HAUS1Q96CS2 278 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 EID2BQ96D98 161 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 ATXN7L3BQ96GX2 97 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 OXNAD1Q96HP4 312 aaPredicted RBP4.09□□□□□ -1.75
VTI1B-203ENST00000554636 HIC2Q96JB3 615 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 AGAP3Q96P47 875 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 OR2M4Q96R27 311 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 MLPHQ9BV36 600 aaPredicted RBP4.09□□□□□ -1.75
VTI1B-203ENST00000554636 CNPPD1Q9BV87 410 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 RIOK2Q9BVS4 552 aaKnown RBP4.09□□□□□ -1.75
VTI1B-203ENST00000554636 MAK16Q9BXY0 300 aaKnown RBP4.09□□□□□ -1.75
VTI1B-203ENST00000554636 MRPL46Q9H2W6 279 aaKnown RBP4.09□□□□□ -1.75
VTI1B-203ENST00000554636 LRRN3Q9H3W5 708 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 SYNDIG1Q9H7V2 258 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 GLOD4Q9HC38 313 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 ASCL3Q9NQ33 180 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.09□□□□□ -1.75
VTI1B-203ENST00000554636 SPATS2LQ9NUQ6 558 aaKnown RBP4.09□□□□□ -1.75
VTI1B-203ENST00000554636 RLIMQ9NVW2 624 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 HAUS2Q9NVX0 235 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 TRNAU1APQ9NX07 287 aaKnown RBP4.09□□□□□ -1.75
VTI1B-203ENST00000554636 GOLGA6AQ9NYA3 693 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 SEPT10Q9P0V9 454 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 TAAR2Q9P1P5 351 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 APPL1Q9UKG1 709 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 PADI4Q9UM07 663 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 SATB2Q9UPW6 733 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 TMEM98Q9Y2Y6 226 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 ZNF711Q9Y462 761 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 PLEKHM1Q9Y4G2 1056 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 SPEF1Q9Y4P9 236 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 RNF215Q9Y6U7 377 aa4.09□□□□□ -1.75
VTI1B-203ENST00000554636 ZNF106Q9H2Y7 1883 aaKnown RBP4.09□□□□□ -1.76
VTI1B-203ENST00000554636 CCDC187A0A096LP49 1063 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 C1orf232A0A0U1RR37 186 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 LOC285095A0A1B0GVY8 99 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 RGSL1A5PLK6 1076 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 A6NCN8 305 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 HACD1B0YJ81 288 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 ANKRD66B4E2M5 251 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 F5H423 210 aaPredicted RBP4.08□□□□□ -1.76
VTI1B-203ENST00000554636 INPP4BO15327 924 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 TRIAP1O43715 76 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 NUDT21O43809 227 aaKnown RBP4.08□□□□□ -1.76
VTI1B-203ENST00000554636 URI1O94763 535 aaPredicted RBP4.08□□□□□ -1.76
VTI1B-203ENST00000554636 EML2O95834 649 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 CHEK2O96017 543 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 MT-CYBP00156 380 aaPredicted RBP4.08□□□□□ -1.76
VTI1B-203ENST00000554636 SLC4A1P02730 911 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 FGF1P05230 155 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 PIRTP0C851 137 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 EBLN1P0CF75 366 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 ITPKBP27987 946 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 CCKBRP32239 447 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 CA5AP35218 305 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 ACTN2P35609 894 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 NEK2P51955 445 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 ERVPABLB-1P60509 514 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 B4GALNT1Q00973 533 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 CDK18Q07002 472 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 ZFP36L1Q07352 338 aaKnown RBP4.08□□□□□ -1.76
VTI1B-203ENST00000554636 ILF3Q12906 894 aaKnown RBP eCLIP4.08□□□□□ -1.76
VTI1B-203ENST00000554636 TFDP2Q14188 446 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 ZNF267Q14586 743 aaPredicted RBP4.08□□□□□ -1.76
VTI1B-203ENST00000554636 SPA17Q15506 151 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 PYCR3Q53H96 274 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 TEX44Q53QW1 395 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 TFDP3Q5H9I0 405 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 C3orf38Q5JPI3 329 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 ZNF569Q5MCW4 686 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 ALS2CLQ60I27 953 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 AADACL2Q6P093 401 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 SLC30A9Q6PML9 568 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 MARK2Q7KZI7 788 aaKnown RBP4.08□□□□□ -1.76
VTI1B-203ENST00000554636 DAAM2Q86T65 1068 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 GALNT13Q8IUC8 556 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 TMTC1Q8IUR5 882 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 KLHDC8BQ8IXV7 354 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 RCOR2Q8IZ40 523 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 NAGSQ8N159 534 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 ZNF567Q8N184 647 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 PRR18Q8N4B5 295 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 TTC30BQ8N4P2 665 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 TRAM1L1Q8N609 369 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 OR6C4Q8NGE1 309 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 SPATA22Q8NHS9 363 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 TFB1MQ8WVM0 346 aaKnown RBP4.08□□□□□ -1.76
VTI1B-203ENST00000554636 P3H4Q92791 437 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 FGF11Q92914 225 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 FKBP10Q96AY3 582 aa4.08□□□□□ -1.76
VTI1B-203ENST00000554636 GRAMD1AQ96CP6 724 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms