RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, human

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3A-204	ENST00000554574	PSRC1	Q6PGN9	363 aa	Predicted RBP	4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	KDELC1	Q6UW63	502 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PACS1	Q6VY07	963 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	LCNL1	Q6ZST4	164 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	RTL10	Q7L3V2	364 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CCDC197	Q8NCU1	140 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ASB10	Q8WXI3	467 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CABS1	Q96KC9	395 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PRICKLE1	Q96MT3	831 aa	Predicted RBP	4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	KLF6	Q99612	283 aa	Predicted RBP	4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PAIP2	Q9BPZ3	127 aa	Known RBP	4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	APOL2	Q9BQE5	337 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	FICD	Q9BVA6	458 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ELOVL1	Q9BW60	279 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	POLR1E	Q9GZS1	481 aa	Known RBP	4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	IQCG	Q9H095	443 aa	Known RBP	4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SLC25A18	Q9H1K4	315 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CDCP1	Q9H5V8	836 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ZNF334	Q9HCZ1	680 aa	Predicted RBP	4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	NT5M	Q9NPB1	228 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CHRAC1	Q9NRG0	131 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	GKN1	Q9NS71	199 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TBCCD1	Q9NVR7	557 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	NSMCE4A	Q9NXX6	385 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SLC17A7	Q9P2U7	560 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	AGO1	Q9UL18	857 aa	Known RBP	4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	VPS4A	Q9UN37	437 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SH2B3	Q9UQQ2	575 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PLLP	Q9Y342	182 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PSAT1	Q9Y617	370 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	LAMA3	Q16787	3333 aa		4.65	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574		A0A0D9SEW6	157 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	HEATR9	A2RTY3	570 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	FAM90A7P	A6NKC0	464 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	FAM90A22P	A8MWA6	464 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	FAM90A12P	A8MX19	464 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	FAM90A23P	A8MXZ1	464 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	KLF11	O14901	512 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	KDELR3	O43731	214 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PAPSS2	O95340	614 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	C1R	P00736	705 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	EPO	P01588	193 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	MBP	P02686	304 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ALDOA	P04075	364 aa	Known RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TMIGD3	P0DMS9	266 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	MBL2	P11226	248 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ZNF37A	P17032	561 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	NMBR	P28336	390 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SPR	P35270	261 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ACVRL1	P37023	503 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	HADHA	P40939	763 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CD86	P42081	329 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	MAGEA12	P43365	314 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PCP4	P48539	62 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	LIMK2	P53671	638 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TPTE	P56180	551 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SUMO2	P61956	95 aa	Known RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PSG6	Q00889	435 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ZNF177	Q13360	481 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	BMPR2	Q13873	1038 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ZNF235	Q14590	738 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	RFTN1	Q14699	578 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	POU6F1	Q14863	301 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	HSP90AA5P	Q58FG0	334 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SLC22A25	Q6T423	547 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CES3	Q6UWW8	571 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	KYAT3	Q6YP21	454 aa	Known RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PTCHD4	Q6ZW05	846 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	KCNMB4	Q86W47	210 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CNTN4	Q8IWV2	1026 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	FAM217A	Q8IXS0	508 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	NDUFAF2	Q8N183	169 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	BBS5	Q8N3I7	341 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PGBD5	Q8N414	524 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PNPLA1	Q8N8W4	532 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	OR52L2P	Q8NGH6	319 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	IL17D	Q8TAD2	202 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ARRDC2	Q8TBH0	407 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PHOSPHO2	Q8TCD6	241 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	LRRC8C	Q8TDW0	803 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	GLMP	Q8WWB7	406 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ZNF75CP	Q92670	426 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	BAD	Q92934	168 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ATP2A3	Q93084	1043 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	RFK	Q969G6	155 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ELP4	Q96EB1	424 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ZNF778	Q96MU6	729 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	KLHL5	Q96PQ7	755 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	FAM111A	Q96PZ2	611 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PSKH2	Q96QS6	385 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SLC22A12	Q96S37	553 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	RANBP9	Q96S59	729 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	RAD9A	Q99638	391 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	RBBP8	Q99708	897 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	MGME1	Q9BQP7	344 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ALG8	Q9BVK2	526 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PITPNM3	Q9BZ71	974 aa		4.64	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ZCCHC4	Q9H5U6	513 aa		4.64	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms