RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 RERGQ96A58 199 aaPredicted RBP8.33□□□□□ -1.08
ACTN1-213ENST00000554508 COL26A1Q96A83 441 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 MVB12AQ96EY5 273 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 CFAP36Q96G28 342 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 HIST1H2AHQ96KK5 128 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 PWWP2AQ96N64 755 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 NDNQ99608 321 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 SMAD5Q99717 465 aaKnown RBP8.33□□□□□ -1.08
ACTN1-213ENST00000554508 HIST1H2AJQ99878 128 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 RHOXF2Q9BQY4 288 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 H2AFJQ9BTM1 129 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 PARVBQ9HBI1 364 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 SLC6A20Q9NP91 592 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 ATP13A2Q9NQ11 1180 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 SEMA3GQ9NS98 782 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 TMEM184CQ9NVA4 438 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 P4HTMQ9NXG6 502 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 CHMP2BQ9UQN3 213 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 VWA7Q9Y334 891 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 ESPL1Q14674 2120 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 SHANK1Q9Y566 2161 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 SCN2AQ99250 2005 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 TENM4Q6N022 2769 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 KCNE1BA0A087WTH5 132 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 IGKV1-8A0A0C4DH67 115 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 PABPN1LA6NDY0 278 aaKnown RBP8.32□□□□□ -1.08
ACTN1-213ENST00000554508 A6NL46 340 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 VSTM2BA6NLU5 285 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 E7ESA3 106 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 AGPSO00116 658 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 IPO13O94829 963 aaKnown RBP8.32□□□□□ -1.08
ACTN1-213ENST00000554508 ZIC2O95409 532 aaPredicted RBP8.32□□□□□ -1.08
ACTN1-213ENST00000554508 ATXN8OSP0DMR3 200 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 OR1D4P47884 311 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 CDKN2DP55273 166 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 FOXK1P85037 733 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 CAV1Q03135 178 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 OCA2Q04671 838 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 ILF2Q12905 390 aaKnown RBP8.32□□□□□ -1.08
ACTN1-213ENST00000554508 PDIA2Q13087 525 aaKnown RBP8.32□□□□□ -1.08
ACTN1-213ENST00000554508 PDAP1Q13442 181 aaKnown RBP8.32□□□□□ -1.08
ACTN1-213ENST00000554508 FAM53BQ14153 422 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 MYBPC3Q14896 1274 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 TRADDQ15628 312 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 HP1BP3Q5SSJ5 553 aaPredicted RBP8.32□□□□□ -1.08
ACTN1-213ENST00000554508 TEX35Q5T0J7 233 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 RBM20Q5T481 1227 aaKnown RBP8.32□□□□□ -1.08
ACTN1-213ENST00000554508 VWA5B1Q5TIE3 1220 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 HECTD2Q5U5R9 776 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 PAQR3Q6TCH7 311 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 COX15Q7KZN9 410 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 PPP1R32Q7Z5V6 425 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 GALNT16Q8N428 558 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 CSNK1A1LQ8N752 337 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 LRRN4CLQ8ND94 238 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.32□□□□□ -1.08
ACTN1-213ENST00000554508 IFT81Q8WYA0 676 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 THAP11Q96EK4 314 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 PDLIM5Q96HC4 596 aaKnown RBP8.32□□□□□ -1.08
ACTN1-213ENST00000554508 CABS1Q96KC9 395 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 OR2A5Q96R48 311 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 SPSB2Q99619 263 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 NUDT9Q9BW91 350 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 TRIM54Q9BYV2 358 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 PLAC1Q9HBJ0 212 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 CCDC177Q9NQR7 707 aaPredicted RBP8.32□□□□□ -1.08
ACTN1-213ENST00000554508 NSMCE4AQ9NXX6 385 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 GRHL1Q9NZI5 618 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 ZFATQ9P243 1243 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 STOX2Q9P2F5 926 aaPredicted RBP8.32□□□□□ -1.08
ACTN1-213ENST00000554508 ZNF282Q9UDV7 671 aaPredicted RBP8.32□□□□□ -1.08
ACTN1-213ENST00000554508 DMGDHQ9UI17 866 aaKnown RBP8.32□□□□□ -1.08
ACTN1-213ENST00000554508 ADAMTS6Q9UKP5 1117 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 PDE10AQ9Y233 779 aa8.32□□□□□ -1.08
ACTN1-213ENST00000554508 IGLV3-12A0A075B6K2 115 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 TTLL8A6PVC2 850 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 H7BY64 318 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 SOCS6O14544 535 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 TP73O15350 636 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 EIF3HO15372 352 aaKnown RBP eCLIP8.31□□□□□ -1.08
ACTN1-213ENST00000554508 NRP2O60462 931 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 SLU7O95391 586 aaKnown RBP8.31□□□□□ -1.08
ACTN1-213ENST00000554508 ALPPP05187 535 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 ENO2P09104 434 aaPredicted RBP8.31□□□□□ -1.08
ACTN1-213ENST00000554508 FBLP22087 321 aaKnown RBP8.31□□□□□ -1.08
ACTN1-213ENST00000554508 FDXRP22570 491 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 VARSP26640 1264 aaKnown RBP8.31□□□□□ -1.08
ACTN1-213ENST00000554508 GRK3P35626 688 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 CD97P48960 835 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 MLLT10P55197 1068 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 AP1S2P56377 157 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 RPS15AP62244 130 aaKnown RBP8.31□□□□□ -1.08
ACTN1-213ENST00000554508 TBPL1P62380 186 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 MGAT5Q09328 741 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 AIMP2Q13155 320 aaKnown RBP8.31□□□□□ -1.08
ACTN1-213ENST00000554508 IGFBP7Q16270 282 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 RBBP7Q16576 425 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 NDUFA9Q16795 377 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 PRAMEF13Q5VWM6 474 aa8.31□□□□□ -1.08
ACTN1-213ENST00000554508 TRMT10BQ6PF06 316 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms