RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 RAPSNQ13702 412 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 MED25Q71SY5 747 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 VRK3Q8IV63 474 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 CPNE9Q8IYJ1 553 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 ZBTB2Q8N680 514 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 OR2L2Q8NH16 312 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 KCTD4Q8WVF5 259 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 ZFPM2Q8WW38 1151 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 ELMO1Q92556 727 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 STMN4Q9H169 189 aaPredicted RBP13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 VPS11Q9H270 941 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 ACTR5Q9H9F9 607 aaPredicted RBP13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 GPAMQ9HCL2 828 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 MED4Q9NPJ6 270 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 ZNF358Q9NW07 568 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 GPR83Q9NYM4 423 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 SENP1Q9P0U3 644 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 COLEC10Q9Y6Z7 277 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 UNC79Q9P2D8 2635 aa13.49□□□□□ -0.25
SPTLC2-202ENST00000554365 A0A087X1B8 175 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 C17orf113A0A1B0GUU1 675 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 GSAPA4D1B5 854 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 HMGB1P1B2RPK0 211 aaPredicted RBP13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 TMEM150CB9EJG8 249 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 F8W8V4 182 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 SPAG7O75391 227 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 SLCO2B1O94956 709 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 DDAH2O95865 285 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 GSTM1P09488 218 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 COL8A1P27658 744 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 RORAP35398 523 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 SLC26A3P40879 764 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 PREPP48147 710 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 RRADP55042 308 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 GSTM4Q03013 218 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 ATP1A4Q13733 1029 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 MPP2Q14168 576 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 PTCHD3Q3KNS1 767 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 ZNF787Q6DD87 383 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 UGT3A1Q6NUS8 523 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 CYHR1Q6ZMK1 362 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 RAPH1Q70E73 1250 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 OTOAQ7RTW8 1153 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 HPS6Q86YV9 775 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 SYTL1Q8IYJ3 562 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 CFAP206Q8IYR0 622 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 SPATA6LQ8N4H0 392 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 RBMXL3Q8N7X1 1067 aaKnown RBP13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 TMEM102Q8N9M5 508 aaPredicted RBP13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 OR1L3Q8NH93 324 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 HM13Q8TCT9 377 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 EEF1AKMT1Q8WVE0 214 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 PNPLA2Q96AD5 504 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 NXNL1Q96CM4 212 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 APOPT1Q96IL0 206 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 CABS1Q96KC9 395 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 RMDN2Q96LZ7 410 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 TSSK1BQ9BXA7 367 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 COG4Q9H9E3 785 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 SSU72Q9NP77 194 aaKnown RBP13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 C1GALT1Q9NS00 363 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 POMT2Q9UKY4 750 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 EMCNQ9ULC0 261 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 ACOT9Q9Y305 439 aa13.48□□□□□ -0.25
SPTLC2-202ENST00000554365 NOTCH2Q04721 2471 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 KLHL2O95198 593 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 CAPN1P07384 714 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 CCDC166P0CW27 439 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 ATXN8OSP0DMR3 200 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 COL6A2P12110 1019 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 CD1DP15813 335 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 VARSP26640 1264 aaKnown RBP13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 NDUFS1P28331 727 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 CRHR1P34998 444 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 BOP1Q14137 746 aaKnown RBP13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 FAM198BQ6UWH4 519 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 MAMDC2Q7Z304 686 aaPredicted RBP13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 PIWIL4Q7Z3Z4 852 aaKnown RBP13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 CCDC91Q7Z6B0 441 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 GOLGA6L1Q8N7Z2 621 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 LCN9Q8WX39 176 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 C19orf60Q96EN9 201 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 LINGO1Q96FE5 620 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 PDLIM5Q96HC4 596 aaKnown RBP13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 FERD3LQ96RJ6 166 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 SMC6Q96SB8 1091 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 UNKQ9C0B0 810 aaKnown RBP13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 DERL2Q9GZP9 239 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 KLHL25Q9H0H3 589 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 C12orf65Q9H3J6 166 aaKnown RBP13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 SRMSQ9H3Y6 488 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 SYTL2Q9HCH5 934 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 SERTAD3Q9UJW9 196 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 HEBP2Q9Y5Z4 205 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 SHANK1Q9Y566 2161 aa13.47□□□□□ -0.25
SPTLC2-202ENST00000554365 KLHL33A6NCF5 533 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 C9J4A7 227 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 EIF3FO00303 357 aaPredicted RBP13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 MATN2O00339 956 aa13.46□□□□□ -0.25
SPTLC2-202ENST00000554365 LIN7AO14910 233 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms