RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 AURKBQ96GD4 344 aaPredicted RBP5.78□□□□□ -1.48
VPS33B-203ENST00000554264 UBXN10Q96LJ8 280 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 CCDC138Q96M89 665 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 AGAP2Q99490 1192 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 IL12RB2Q99665 862 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 NPAS2Q99743 824 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 MLPHQ9BV36 600 aaPredicted RBP5.78□□□□□ -1.48
VPS33B-203ENST00000554264 FSD1LQ9BXM9 530 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 ERVK-6Q9BXR3 956 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 ZDHHC5Q9C0B5 715 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 ARRDC1-AS1Q9H2J1 176 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 RETREG1Q9H6L5 497 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 NOL11Q9H8H0 719 aaKnown RBP5.78□□□□□ -1.48
VPS33B-203ENST00000554264 CXorf21Q9HAI6 301 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 TRPV4Q9HBA0 871 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 HMG20AQ9NP66 347 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 HPS4Q9NQG7 708 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 SDR39U1Q9NRG7 319 aaPredicted RBP5.78□□□□□ -1.48
VPS33B-203ENST00000554264 TREX1Q9NSU2 369 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 RHBDL2Q9NX52 303 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 DUS2Q9NX74 493 aaKnown RBP5.78□□□□□ -1.48
VPS33B-203ENST00000554264 SUN2Q9UH99 717 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 ANAPC2Q9UJX6 822 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 FBXO5Q9UKT4 447 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 MAFFQ9ULX9 164 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 TMED5Q9Y3A6 229 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 PCDHGA5Q9Y5G8 931 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 FADS3Q9Y5Q0 445 aa5.78□□□□□ -1.48
VPS33B-203ENST00000554264 TDRD15B5MCY1 1934 aaKnown RBP5.78□□□□□ -1.48
VPS33B-203ENST00000554264 CHD8Q9HCK8 2581 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 FAM208BQ5VWN6 2430 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 SHROOM3Q8TF72 1996 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 BAHCC1Q9P281 2608 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 A0A0J9YYE9 177 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 A0A1W2PP18 115 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 A8MT66 165 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 HEPACAM2A8MVW5 462 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 H7C4K7 107 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 KCNK1O00180 336 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 FBP2O00757 339 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 EEDO75530 441 aaKnown RBP5.77□□□□□ -1.49
VPS33B-203ENST00000554264 RPP40O75818 363 aaKnown RBP5.77□□□□□ -1.49
VPS33B-203ENST00000554264 SEC14L2O76054 403 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 RECQL4O94761 1208 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 B3GAT3O94766 335 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 SORBS2O94875 1100 aaKnown RBP5.77□□□□□ -1.49
VPS33B-203ENST00000554264 ABLIM3O94929 683 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 BCL10O95999 233 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 OCM2P0CE71 109 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 OCMP0CE72 109 aaPredicted RBP5.77□□□□□ -1.49
VPS33B-203ENST00000554264 SLC2A3P11169 496 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 MBL2P11226 248 aaPredicted RBP5.77□□□□□ -1.49
VPS33B-203ENST00000554264 GFAPP14136 432 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 OGNP20774 298 aaKnown RBP5.77□□□□□ -1.49
VPS33B-203ENST00000554264 CD9P21926 228 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 GPX3P22352 226 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 GSTM2P28161 218 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 NMBRP28336 390 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 PCSK1P29120 753 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 PCSK6P29122 969 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 ADORA2BP29275 332 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 MPLP40238 635 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 VIPR2P41587 438 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 GRIA3P42263 894 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 DPP6P42658 865 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 ERFP50548 548 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 RENBPP51606 427 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 SLC7A2P52569 658 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 NDST2P52849 883 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 KCNK10P57789 538 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 PLOD1Q02809 727 aaPredicted RBP5.77□□□□□ -1.49
VPS33B-203ENST00000554264 ZNF846Q147U1 533 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 EIF4HQ15056 248 aaKnown RBP5.77□□□□□ -1.49
VPS33B-203ENST00000554264 RPS6KA2Q15349 733 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 MAPRE1Q15691 268 aaKnown RBP5.77□□□□□ -1.49
VPS33B-203ENST00000554264 NDUFA5Q16718 116 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 RAB6CQ53S08 254 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 RAB41Q5JT25 222 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 CERCAMQ5T4B2 595 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 OTUD1Q5VV17 481 aaPredicted RBP5.77□□□□□ -1.49
VPS33B-203ENST00000554264 TPGS2Q68CL5 300 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 TMEM200BQ69YZ2 307 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 ZNF470Q6ECI4 717 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 MRNIPQ6NTE8 343 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 Q6ZS52 159 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 RALGPS2Q86X27 583 aaPredicted RBP5.77□□□□□ -1.49
VPS33B-203ENST00000554264 SLC41A1Q8IVJ1 513 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 FAM9CQ8IZT9 166 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 LGI4Q8N135 537 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 CBR4Q8N4T8 237 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 PIK3C3Q8NEB9 887 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 OR13F1Q8NGS4 319 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 GIPC3Q8TF64 312 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 HEXDCQ8WVB3 486 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 HDAC2Q92769 488 aaKnown RBP5.77□□□□□ -1.49
VPS33B-203ENST00000554264 SLCO4A1Q96BD0 722 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 TCEAL4Q96EI5 215 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 SMARCD1Q96GM5 515 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 PLEKHA8Q96JA3 519 aa5.77□□□□□ -1.49
VPS33B-203ENST00000554264 DNAJC1Q96KC8 554 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms