RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 CCDC71Q8IV32 467 aaPredicted RBP8.55□□□□□ -1.04
PRKCH-208ENST00000553846 LGI4Q8N135 537 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 CPSF7Q8N684 471 aaKnown RBP8.55□□□□□ -1.04
PRKCH-208ENST00000553846 TMEM178AQ8NBL3 297 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 SEC16BQ96JE7 1060 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 ZNF354BQ96LW1 612 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 OR2A5Q96R48 311 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 MIPEPQ99797 713 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 ZFYVE21Q9BQ24 234 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 UTP23Q9BRU9 249 aaKnown RBP8.55□□□□□ -1.04
PRKCH-208ENST00000553846 MAK16Q9BXY0 300 aaKnown RBP8.55□□□□□ -1.04
PRKCH-208ENST00000553846 MMP25Q9NPA2 562 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 LMBRD1Q9NUN5 540 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 DNAJB12Q9NXW2 375 aaKnown RBP8.55□□□□□ -1.04
PRKCH-208ENST00000553846 GNPTGQ9UJJ9 305 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 PLEKHA6Q9Y2H5 1048 aa8.55□□□□□ -1.04
PRKCH-208ENST00000553846 HIVEP2P31629 2446 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 OR51F1A6NGY5 319 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 GABRR3A8MPY1 467 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 HACD1B0YJ81 288 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 P2RX6O15547 441 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 KDM1AO60341 852 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 GYPCP04921 128 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 TMEM253P0C7T8 217 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 RBL1P28749 1068 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 ZBED6P86452 979 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 MAT1AQ00266 395 aaKnown RBP8.54□□□□□ -1.04
PRKCH-208ENST00000553846 TFDP2Q14188 446 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 MEP1AQ16819 746 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 BTBD16Q32M84 506 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 GARNL3Q5VVW2 1013 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 ZNF425Q6IV72 752 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 CEP128Q6ZU80 1094 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 CXXC5Q7LFL8 322 aaKnown RBP8.54□□□□□ -1.04
PRKCH-208ENST00000553846 CPEB2Q7Z5Q1 589 aaKnown RBP8.54□□□□□ -1.04
PRKCH-208ENST00000553846 ANKRD37Q7Z713 158 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 PCGF5Q86SE9 256 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 PAQR7Q86WK9 346 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 EID3Q8N140 333 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 ARMC10Q8N2F6 343 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 CSNK1A1LQ8N752 337 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 SLC35G2Q8TBE7 412 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 HAUS1Q96CS2 278 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 CYTH2Q99418 400 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 REPIN1Q9BWE0 567 aaKnown RBP8.54□□□□□ -1.04
PRKCH-208ENST00000553846 KCNJ16Q9NPI9 418 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 RASSF1Q9NS23 344 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.54□□□□□ -1.04
PRKCH-208ENST00000553846 IMPACTQ9P2X3 320 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 FEZ2Q9UHY8 353 aaPredicted RBP8.54□□□□□ -1.04
PRKCH-208ENST00000553846 CAPN11Q9UMQ6 739 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 CDC14AQ9UNH5 594 aa8.54□□□□□ -1.04
PRKCH-208ENST00000553846 A0A0A6YYC8 382 aaPredicted RBP8.53□□□□□ -1.04
PRKCH-208ENST00000553846 A0A1B0GTH9 108 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 FAM237BA0A1B0GVD1 139 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 OR2W5A6NFC9 320 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 A8MUI8 341 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 I3L1I5 382 aaPredicted RBP8.53□□□□□ -1.04
PRKCH-208ENST00000553846 CDK2AP1O14519 115 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 PRPF4O43172 522 aaKnown RBP eCLIP8.53□□□□□ -1.04
PRKCH-208ENST00000553846 SLC25A12O75746 678 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 ZWINTO95229 277 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 ATE1O95260 518 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 C1orf105O95561 183 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 EIF2S1P05198 315 aaKnown RBP8.53□□□□□ -1.04
PRKCH-208ENST00000553846 HEXAP06865 529 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 CD46P15529 392 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 AOAHP28039 575 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 PTGS2P35354 604 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 MARCKSL1P49006 195 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 MEOX1P50221 254 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 NUP107P57740 925 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 MYBPHQ13203 477 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 FAM53BQ14153 422 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 SPARCL1Q14515 664 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 TCEAL1Q15170 157 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 SLC18A3Q16572 532 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 SYTL3Q4VX76 610 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 ANKRD20A2Q5SQ80 823 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 ANKRD20A1Q5TYW2 823 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 ANKRD20A3Q5VUR7 823 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 SLC25A25Q6KCM7 469 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 LRRC8BQ6P9F7 803 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 PAMR1Q6UXH9 720 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 CLEC17AQ6ZS10 378 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 BBS12Q6ZW61 710 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 TAS2R42Q7RTR8 314 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 PRSS41Q7RTY9 318 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 OR13J1Q8NGT2 312 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 C16orf52Q8NHV5 167 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 M1APQ8TC57 530 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 CTNNBL1Q8WYA6 563 aaPredicted RBP8.53□□□□□ -1.04
PRKCH-208ENST00000553846 P3H4Q92791 437 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 MMABQ96EY8 250 aaPredicted RBP8.53□□□□□ -1.04
PRKCH-208ENST00000553846 MS4A3Q96HJ5 214 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 CABS1Q96KC9 395 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 C18orf12Q96KH6 178 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 TBL1YQ9BQ87 522 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 BPIFA3Q9BQP9 254 aa8.53□□□□□ -1.04
PRKCH-208ENST00000553846 PLCD4Q9BRC7 762 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms