RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 DYNC2LI1Q8TCX1 351 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 ASB11Q8WXH4 323 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 MAL2Q969L2 176 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 SH3KBP1Q96B97 665 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 IGSF21Q96ID5 467 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 FCRL1Q96LA6 429 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 FRG2BQ96QU4 278 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 MTERF1Q99551 399 aaKnown RBP6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 SLC12A9Q9BXP2 914 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 SMG9Q9H0W8 520 aaKnown RBP6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 ACOT13Q9NPJ3 140 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 POLE4Q9NR33 117 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 TMEM184CQ9NVA4 438 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 NDRG4Q9ULP0 352 aaKnown RBP6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 SNX6Q9UNH7 406 aa6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 SAMHD1Q9Y3Z3 626 aaKnown RBP6.71□□□□□ -1.33
LINC-ROR-201ENST00000553704 ALPK3Q96L96 1907 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 PRRG1O14668 218 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 SGTAO43765 313 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 OLFM2O95897 454 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 CBSLP0DN79 551 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 LAMP1P11279 417 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 COX7A2P14406 83 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 ACPPP15309 386 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 GJA1P17302 382 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 TNFRSF1BP20333 461 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 FPR1P21462 350 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 SERPINA4P29622 427 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 KDELR2P33947 212 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 CBSP35520 551 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 MAGEA10P43363 369 aaPredicted RBP6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 CASP9P55211 416 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 ITGA1P56199 1179 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 MVKQ03426 396 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 CHIT1Q13231 466 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 DNASE1L3Q13609 305 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 TRIM16LQ309B1 348 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 PLEKHG6Q3KR16 790 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 SYT6Q5T7P8 510 aaPredicted RBP6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 ZNF621Q6ZSS3 439 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 AHSA2Q719I0 299 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 DSG4Q86SJ6 1040 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 P2RY8Q86VZ1 359 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 HORMAD1Q86X24 394 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 LILRA3Q8N6C8 439 aaPredicted RBP6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 KLHL23Q8NBE8 558 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 ZNF540Q8NDQ6 660 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 DNASE1L2Q92874 299 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 TPD52L3Q96J77 140 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 SIGLEC11Q96RL6 698 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 LYSMD1Q96S90 227 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 MROQ9BYG7 248 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 CHST8Q9H2A9 424 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 ZDHHC6Q9H6R6 413 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 KRT84Q9NSB2 600 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 THUMPD1Q9NXG2 353 aaKnown RBP6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 CFAP97Q9P2B7 532 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 PNMA8BQ9ULN7 279 aaPredicted RBP6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 AP3M1Q9Y2T2 418 aa6.71□□□□□ -1.34
LINC-ROR-201ENST00000553704 MAGEB17A8MXT2 336 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 TTC34A8MYJ7 566 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 NUAK1O60285 661 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 EPN2O95208 641 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 LATS1O95835 1130 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 VIPP01282 170 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 DNAJA1P31689 397 aaKnown RBP6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 ALDH7A1P49419 539 aaKnown RBP6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 CCL23P55773 120 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 RPS3AP61247 264 aaKnown RBP6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 OCA2Q04671 838 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 VEPH1Q14D04 833 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 MAPK11Q15759 364 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 KIAA1614Q5VZ46 1190 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 GPR153Q6NV75 609 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 FAHD1Q6P587 224 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 C22orf39Q6P5X5 142 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 TPRG1Q6ZUI0 275 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 CBLL1Q75N03 491 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 FAM124AQ86V42 546 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 ENTHD1Q8IYW4 607 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 CMTM8Q8IZV2 173 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 ATG16L2Q8NAA4 619 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 CHST14Q8NCH0 376 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 SETD9Q8NE22 299 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 DNAJB8Q8NHS0 232 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 SCAMP4Q969E2 229 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 TBC1D20Q96BZ9 403 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 ECHDC3Q96DC8 303 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 ASIC4Q96FT7 647 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 SCRN2Q96FV2 425 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 VMP1Q96GC9 406 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 POM121Q96HA1 1249 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 SAMD11Q96NU1 681 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 SLIRPQ9GZT3 109 aaKnown RBP6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 HMG20AQ9NP66 347 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 ABCB8Q9NUT2 735 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 DNAJC11Q9NVH1 559 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 KIF17Q9P2E2 1029 aa6.7□□□□□ -1.34
LINC-ROR-201ENST00000553704 B4GALT6Q9UBX8 382 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms