RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 QSOX1O00391 747 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 PROM1O43490 865 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 TPOP07202 933 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 OR56A5P0C7T3 313 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 FOSL1P15407 271 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 CD46P15529 392 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 ZNF24P17028 368 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 MSNP26038 577 aaKnown RBP12.19□□□□□ -0.46
VPS29-211ENST00000553128 CHRNB4P30926 498 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 RFC3P40938 356 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 BDKRB1P46663 353 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 AP2B1P63010 937 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 PLOD1Q02809 727 aaPredicted RBP12.19□□□□□ -0.46
VPS29-211ENST00000553128 POU6F1Q14863 301 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 ASTE1Q2TB18 679 aaPredicted RBP12.19□□□□□ -0.46
VPS29-211ENST00000553128 TMEM198Q66K66 360 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 ITPRIPL1Q6GPH6 555 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 SLC25A25Q6KCM7 469 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 LRRC8BQ6P9F7 803 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 CPEB2Q7Z5Q1 589 aaKnown RBP12.19□□□□□ -0.46
VPS29-211ENST00000553128 ZNF227Q86WZ6 799 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 CSNK1A1LQ8N752 337 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 TMEM178AQ8NBL3 297 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 CYTH2Q99418 400 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 ZFYVE21Q9BQ24 234 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 KCNK13Q9HB14 408 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 KCNJ16Q9NPI9 418 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 GNPTGQ9UJJ9 305 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 CAPN11Q9UMQ6 739 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 CDC14AQ9UNH5 594 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 AAR2Q9Y312 384 aaKnown RBP12.19□□□□□ -0.46
VPS29-211ENST00000553128 NFS1Q9Y697 457 aa12.19□□□□□ -0.46
VPS29-211ENST00000553128 FN1P02751 2386 aaKnown RBP12.19□□□□□ -0.46
VPS29-211ENST00000553128 CCDC162PA2VCL2 907 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 H7C0C1 242 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 P2RX6O15547 441 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 CTAG2O75638 210 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 GYPCP04921 128 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 PTGS2P35354 604 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 ATP5OP48047 213 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 MARCKSL1P49006 195 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 DLX5P56178 289 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 OC90Q02509 493 aaPredicted RBP12.18□□□□□ -0.46
VPS29-211ENST00000553128 SNTB1Q13884 538 aaKnown RBP12.18□□□□□ -0.46
VPS29-211ENST00000553128 SLC18A3Q16572 532 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 MAPKAPK3Q16644 382 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 MEP1AQ16819 746 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 UNC5DQ6UXZ4 953 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 TAOK1Q7L7X3 1001 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 KRT222Q8N1A0 295 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 WFDC11Q8NEX6 87 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 ASB5Q8WWX0 329 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 MVB12AQ96EY5 273 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 SEC16BQ96JE7 1060 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 FAM118BQ9BPY3 351 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 DPH7Q9BTV6 452 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 ACAT2Q9BWD1 397 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 REPIN1Q9BWE0 567 aaKnown RBP12.18□□□□□ -0.46
VPS29-211ENST00000553128 HEMGNQ9BXL5 484 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 GOLPH3Q9H4A6 298 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 LRFN1Q9P244 771 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 R3HDM2Q9Y2K5 976 aaKnown RBP12.18□□□□□ -0.46
VPS29-211ENST00000553128 SCN2AQ99250 2005 aa12.18□□□□□ -0.46
VPS29-211ENST00000553128 IGKV1-8A0A0C4DH67 115 aa12.17□□□□□ -0.46
VPS29-211ENST00000553128 PRPF4O43172 522 aaKnown RBP eCLIP12.17□□□□□ -0.46
VPS29-211ENST00000553128 KLK8O60259 260 aa12.17□□□□□ -0.46
VPS29-211ENST00000553128 ABCB7O75027 752 aa12.17□□□□□ -0.46
VPS29-211ENST00000553128 FKBP9O95302 570 aa12.17□□□□□ -0.46
VPS29-211ENST00000553128 SERPINC1P01008 464 aa12.17□□□□□ -0.46
VPS29-211ENST00000553128 STATHP02808 62 aa12.17□□□□□ -0.46
VPS29-211ENST00000553128 ANXA5P08758 320 aa12.17□□□□□ -0.46
VPS29-211ENST00000553128 EMP3P54852 163 aa12.17□□□□□ -0.46
VPS29-211ENST00000553128 PRPSAP1Q14558 356 aa12.17□□□□□ -0.46
VPS29-211ENST00000553128 SEMA3AQ14563 771 aa12.17□□□□□ -0.46
VPS29-211ENST00000553128 CCDC38Q502W7 563 aa12.17□□□□□ -0.46
VPS29-211ENST00000553128 EMC4Q5J8M3 183 aa12.17□□□□□ -0.46
VPS29-211ENST00000553128 PRSS41Q7RTY9 318 aa12.17□□□□□ -0.46
VPS29-211ENST00000553128 ANKRD37Q7Z713 158 aa12.17□□□□□ -0.46
VPS29-211ENST00000553128 EID3Q8N140 333 aa12.17□□□□□ -0.46
VPS29-211ENST00000553128 STYXQ8WUJ0 223 aa12.17□□□□□ -0.46
VPS29-211ENST00000553128 METTL21AQ8WXB1 218 aa12.17□□□□□ -0.46
VPS29-211ENST00000553128 PWWP2AQ96N64 755 aa12.17□□□□□ -0.46
VPS29-211ENST00000553128 GPATCH1Q9BRR8 931 aaKnown RBP12.17□□□□□ -0.46
VPS29-211ENST00000553128 POLDIP3Q9BY77 421 aaKnown RBP12.17□□□□□ -0.46
VPS29-211ENST00000553128 L3MBTL1Q9Y468 752 aa12.17□□□□□ -0.46
VPS29-211ENST00000553128 JMJD1CQ15652 2540 aa12.17□□□□□ -0.46
VPS29-211ENST00000553128 FAM237BA0A1B0GVD1 139 aa12.16□□□□□ -0.46
VPS29-211ENST00000553128 MROH6A6NGR9 719 aa12.16□□□□□ -0.46
VPS29-211ENST00000553128 SPOPO43791 374 aa12.16□□□□□ -0.46
VPS29-211ENST00000553128 NME2P1O60361 137 aa12.16□□□□□ -0.46
VPS29-211ENST00000553128 CDC40O60508 579 aaKnown RBP eCLIP12.16□□□□□ -0.46
VPS29-211ENST00000553128 SLC25A12O75746 678 aa12.16□□□□□ -0.46
VPS29-211ENST00000553128 C1orf105O95561 183 aa12.16□□□□□ -0.46
VPS29-211ENST00000553128 RPN2P04844 631 aa12.16□□□□□ -0.46
VPS29-211ENST00000553128 NME2P22392 152 aa12.16□□□□□ -0.46
VPS29-211ENST00000553128 PSMA3P25788 255 aa12.16□□□□□ -0.46
VPS29-211ENST00000553128 AOAHP28039 575 aa12.16□□□□□ -0.46
VPS29-211ENST00000553128 NUP107P57740 925 aa12.16□□□□□ -0.46
VPS29-211ENST00000553128 PMPCAQ10713 525 aa12.16□□□□□ -0.46
VPS29-211ENST00000553128 MINDY4Q4G0A6 757 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms