RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 KERAO60938 352 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 MT-ND3P03897 115 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 CCNYL3P0C7X3 344 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 LIFP15018 202 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 RORAP35398 523 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 SLC6A12P48065 614 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 HNMTP50135 292 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 ARF3P61204 181 aaPredicted RBP13.51□□□□□ -0.25
PTCH1-226ENST00000553011 CSNK1G2P78368 415 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 ABHD18Q0P651 414 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 COL28A1Q2UY09 1125 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 LCN10Q6JVE6 187 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 TLDC1Q6P9B6 456 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 FAM199XQ6PEV8 388 aaPredicted RBP13.51□□□□□ -0.25
PTCH1-226ENST00000553011 PDPRQ8NCN5 879 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 ESAMQ96AP7 390 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 TSNARE1Q96NA8 513 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 CCDC77Q9BR77 488 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 HAUS8Q9BT25 410 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 SLC7A5P2Q9GIP4 190 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 LHX9Q9NQ69 397 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 PCMTD2Q9NV79 361 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 WWOXQ9NZC7 414 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 PSMC3IPQ9P2W1 217 aaPredicted RBP13.51□□□□□ -0.25
PTCH1-226ENST00000553011 DHCR7Q9UBM7 475 aaKnown RBP13.51□□□□□ -0.25
PTCH1-226ENST00000553011 IL17BQ9UHF5 180 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 PADI1Q9ULC6 663 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 SLC22A14Q9Y267 594 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 SCN2AQ99250 2005 aa13.51□□□□□ -0.25
PTCH1-226ENST00000553011 FEZF1A0PJY2 475 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 SMIM23A6NLE4 172 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 SUPT3HB4E1H0 165 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 MEN1O00255 615 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 SUPT3HO75486 399 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 RFPL1O75677 317 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 WDR47O94967 919 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 EIF2S1P05198 315 aaKnown RBP13.5□□□□□ -0.25
PTCH1-226ENST00000553011 ATXN8OSP0DMR3 200 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 EZRP15311 586 aaKnown RBP13.5□□□□□ -0.25
PTCH1-226ENST00000553011 F8A1P23610 371 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 HRH2P25021 359 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 SLCO1A2P46721 670 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 GCGRP47871 477 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 HSPA7P48741 367 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 ACAP2Q15057 778 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 TECRLQ5HYJ1 363 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 TCTE1Q5JU00 501 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 CDKL4Q5MAI5 379 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 WASHC2DQ5SRD0 308 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 CATSPEREQ5SY80 951 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 LGSNQ5TDP6 509 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 C1orf189Q5VU69 101 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 SULT1C3Q6IMI6 304 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 EMBQ6PCB8 327 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 CCDC81Q6ZN84 652 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 KLHDC8AQ8IYD2 350 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 DSELQ8IZU8 1212 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 TCAIMQ8N3R3 496 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 EPS8L3Q8TE67 593 aaKnown RBP13.5□□□□□ -0.25
PTCH1-226ENST00000553011 CT55Q8WUE5 264 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 MR1Q95460 341 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 NEIL2Q969S2 332 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 LRFN5Q96NI6 719 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 OR2A5Q96R48 311 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 RUFY1Q96T51 708 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 GPN2Q9H9Y4 310 aaPredicted RBP13.5□□□□□ -0.25
PTCH1-226ENST00000553011 NUDT4Q9NZJ9 180 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 TBK1Q9UHD2 729 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 PTBP2Q9UKA9 531 aaKnown RBP13.5□□□□□ -0.25
PTCH1-226ENST00000553011 CROTQ9UKG9 612 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 ASB1Q9Y576 335 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 AP1M2Q9Y6Q5 423 aa13.5□□□□□ -0.25
PTCH1-226ENST00000553011 CFAP47Q6ZTR5 3102 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 IQANK1A0A1B0GTG1 560 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 FOXO6A8MYZ6 492 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 P2RX6O15547 441 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 SRPX2O60687 465 aaPredicted RBP13.49□□□□□ -0.25
PTCH1-226ENST00000553011 MED26O95402 600 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 STATHP02808 62 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 S100BP04271 92 aaPredicted RBP13.49□□□□□ -0.25
PTCH1-226ENST00000553011 HBQ1P09105 142 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 MTHFD2P13995 350 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 TCN2P20062 427 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 GGT5P36269 586 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 DLSTP36957 453 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 UCNP55089 124 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 TMPRSS3P57727 454 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 CXADRP78310 365 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 MEF2AQ02078 507 aaPredicted RBP13.49□□□□□ -0.25
PTCH1-226ENST00000553011 RELAQ04206 551 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 GRM7Q14831 915 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 ARHGAP40Q5TG30 622 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 ZNF385CQ66K41 422 aaPredicted RBP13.49□□□□□ -0.25
PTCH1-226ENST00000553011 RHBDD2Q6NTF9 364 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 KLC3Q6P597 504 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 TIFABQ6ZNK6 161 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 DTWD1Q8N5C7 304 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 TTC29Q8NA56 475 aaPredicted RBP13.49□□□□□ -0.25
PTCH1-226ENST00000553011 ABHD11Q8NFV4 315 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 OR2W6PQ8NHA6 318 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms