RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 TMEM132CQ8N3T6 1108 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 CELF2-AS1Q8N7Q2 184 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 BEND7Q8N7W2 519 aaPredicted RBP5.26□□□□□ -1.57
LIMA1-212ENST00000552491 ATG16L2Q8NAA4 619 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 IPCEF1Q8WWN9 437 aaPredicted RBP5.26□□□□□ -1.57
LIMA1-212ENST00000552491 LINC01599Q8WXQ3 324 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 ELMO1Q92556 727 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 SLC38A4Q969I6 547 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 HSH2DQ96JZ2 352 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 KCNC2Q96PR1 638 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 PITX2Q99697 317 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 PRR14Q9BWN1 585 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 EBPLQ9BY08 206 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 C6orf62Q9GZU0 229 aaPredicted RBP5.26□□□□□ -1.57
LIMA1-212ENST00000552491 NACA2Q9H009 215 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 CLPBQ9H078 707 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 OR51E2Q9H255 320 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 MMP27Q9H306 513 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 PARVBQ9HBI1 364 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 KRT84Q9NSB2 600 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 THUMPD1Q9NXG2 353 aaKnown RBP5.26□□□□□ -1.57
LIMA1-212ENST00000552491 LHX3Q9UBR4 397 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 KLHL3Q9UH77 587 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 SLC6A14Q9UN76 642 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 SAMD4AQ9UPU9 718 aaKnown RBP5.26□□□□□ -1.57
LIMA1-212ENST00000552491 BTBD3Q9Y2F9 522 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 ATP11BQ9Y2G3 1177 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 FCF1Q9Y324 198 aaKnown RBP5.26□□□□□ -1.57
LIMA1-212ENST00000552491 UGT2A1Q9Y4X1 527 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 ALPK3Q96L96 1907 aa5.26□□□□□ -1.57
LIMA1-212ENST00000552491 CCDC88CQ9P219 2028 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 NINQ8N4C6 2090 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 KCNE1BA0A087WTH5 132 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 SAGE2PA6NJ88 616 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 M0R129 80 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 TAF4O00268 1085 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 CLIC1O00299 241 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 RFXANKO14593 260 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 AIREO43918 545 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 NUAK1O60285 661 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 DLGAP3O95886 979 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 FABP3P05413 133 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 RHOCP08134 193 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 EPB42P16452 691 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 ENGP17813 658 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 ATF6P18850 670 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 S100A1P23297 94 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 HMGCLP35914 325 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 PPP3CCP48454 512 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 PCYT1AP49585 367 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 CLK1P49759 484 aaKnown RBP5.25□□□□□ -1.57
LIMA1-212ENST00000552491 LIMK1P53667 647 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 ARHGEF7Q14155 803 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 MRPL58Q14197 206 aaKnown RBP5.25□□□□□ -1.57
LIMA1-212ENST00000552491 ZNF181Q2M3W8 571 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 VMACQ2NL98 169 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 TTLL9Q3SXZ7 439 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 GDPD3Q7L5L3 318 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 CLECL1Q8IZS7 167 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 ELMOD1Q8N336 334 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 METTL4Q8N3J2 472 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 PARP16Q8N5Y8 322 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 SELENOMQ8WWX9 145 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 ULK4Q96C45 1275 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 C7orf34Q96L11 122 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 APOLD1Q96LR9 279 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 COPS4Q9BT78 406 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 CENPOQ9BU64 300 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 ADGRE3Q9BY15 652 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 ITPAQ9BY32 194 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 GPR63Q9BZJ6 419 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 REXO4Q9GZR2 422 aaKnown RBP5.25□□□□□ -1.57
LIMA1-212ENST00000552491 TPK1Q9H3S4 243 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 RETREG1Q9H6L5 497 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 ASB8Q9H765 288 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 IL26Q9NPH9 171 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 TRMT13Q9NUP7 481 aaKnown RBP5.25□□□□□ -1.57
LIMA1-212ENST00000552491 WDR70Q9NW82 654 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 TAS2R16Q9NYV7 291 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 PCDHB1Q9Y5F3 818 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 NOX1Q9Y5S8 564 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 FRMPD3Q5JV73 1810 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 ILVBLA1L0T0 632 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 INPPL1O15357 1258 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 DUSP11O75319 330 aaKnown RBP5.25□□□□□ -1.57
LIMA1-212ENST00000552491 STK16O75716 305 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 ARHGEF15O94989 841 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 CLDN7O95471 211 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 CLDN9O95484 217 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 AVPP01185 164 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 COL6A1P12109 1028 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 ACPPP15309 386 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 ZNF7P17097 686 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-212ENST00000552491 TNFRSF1BP20333 461 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 CTGFP29279 349 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 AQP1P29972 269 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 UGT2B10P36537 528 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 CASP3P42574 277 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 GJA8P48165 433 aa5.25□□□□□ -1.57
LIMA1-212ENST00000552491 GATMP50440 423 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms