RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 CMYA5Q8N3K9 4069 aa12.59□□□□□ -0.39
SNRPF-203ENST00000551316 A0A0A6YYC8 382 aaPredicted RBP12.58□□□□□ -0.4
SNRPF-203ENST00000551316 KLHL33A6NCF5 533 aa12.58□□□□□ -0.4
SNRPF-203ENST00000551316 FIGNL2A6NMB9 653 aa12.58□□□□□ -0.4
SNRPF-203ENST00000551316 RNF223E7ERA6 249 aa12.58□□□□□ -0.4
SNRPF-203ENST00000551316 I3L1I5 382 aaPredicted RBP12.58□□□□□ -0.4
SNRPF-203ENST00000551316 CCL22O00626 93 aa12.58□□□□□ -0.4
SNRPF-203ENST00000551316 FGFR1OPO95684 399 aaKnown RBP12.58□□□□□ -0.4
SNRPF-203ENST00000551316 ROS1P08922 2347 aa12.58□□□□□ -0.4
SNRPF-203ENST00000551316 CELA3AP09093 270 aa12.58□□□□□ -0.4
SNRPF-203ENST00000551316 DESP17661 470 aa12.58□□□□□ -0.4
SNRPF-203ENST00000551316 CDKN1CP49918 316 aaPredicted RBP12.58□□□□□ -0.4
SNRPF-203ENST00000551316 XIAPP98170 497 aa12.58□□□□□ -0.4
SNRPF-203ENST00000551316 DPYSL3Q14195 570 aa12.58□□□□□ -0.4
SNRPF-203ENST00000551316 BRD3Q15059 726 aa12.58□□□□□ -0.4
SNRPF-203ENST00000551316 CHRFAM7AQ494W8 412 aa12.58□□□□□ -0.4
SNRPF-203ENST00000551316 ZC3H12BQ5HYM0 836 aaKnown RBP12.58□□□□□ -0.4
SNRPF-203ENST00000551316 HIST2H2BDQ6DRA6 164 aa12.58□□□□□ -0.4
SNRPF-203ENST00000551316 RNF44Q7L0R7 432 aa12.58□□□□□ -0.4
SNRPF-203ENST00000551316 GLT6D1Q7Z4J2 308 aa12.58□□□□□ -0.4
SNRPF-203ENST00000551316 PQLC3Q8N755 202 aa12.58□□□□□ -0.4
SNRPF-203ENST00000551316 OR5K2Q8NHB8 316 aa12.58□□□□□ -0.4
SNRPF-203ENST00000551316 MMABQ96EY8 250 aaPredicted RBP12.58□□□□□ -0.4
SNRPF-203ENST00000551316 CABS1Q96KC9 395 aa12.58□□□□□ -0.4
SNRPF-203ENST00000551316 SECISBP2Q96T21 854 aaKnown RBP12.58□□□□□ -0.4
SNRPF-203ENST00000551316 CCL19Q99731 98 aa12.58□□□□□ -0.4
SNRPF-203ENST00000551316 AGPAT1Q99943 283 aa12.58□□□□□ -0.4
SNRPF-203ENST00000551316 ASB8Q9H765 288 aa12.58□□□□□ -0.4
SNRPF-203ENST00000551316 TRIM45Q9H8W5 580 aaPredicted RBP12.58□□□□□ -0.4
SNRPF-203ENST00000551316 MMP25Q9NPA2 562 aa12.58□□□□□ -0.4
SNRPF-203ENST00000551316 MKKSQ9NPJ1 570 aaPredicted RBP12.58□□□□□ -0.4
SNRPF-203ENST00000551316 RUVBL1Q9Y265 456 aaKnown RBP12.58□□□□□ -0.4
SNRPF-203ENST00000551316 ARL5AQ9Y689 179 aa12.58□□□□□ -0.4
SNRPF-203ENST00000551316 SRP72O76094 671 aaKnown RBP12.57□□□□□ -0.4
SNRPF-203ENST00000551316 FAM157CP0CG43 387 aa12.57□□□□□ -0.4
SNRPF-203ENST00000551316 ATP1A3P13637 1013 aa12.57□□□□□ -0.4
SNRPF-203ENST00000551316 ENDOUP21128 410 aaKnown RBP12.57□□□□□ -0.4
SNRPF-203ENST00000551316 PCK1P35558 622 aa12.57□□□□□ -0.4
SNRPF-203ENST00000551316 PEX19P40855 299 aa12.57□□□□□ -0.4
SNRPF-203ENST00000551316 MUM1Q2TAK8 710 aa12.57□□□□□ -0.4
SNRPF-203ENST00000551316 RIPPLY2Q5TAB7 128 aa12.57□□□□□ -0.4
SNRPF-203ENST00000551316 PAPD4Q6PIY7 484 aaKnown RBP12.57□□□□□ -0.4
SNRPF-203ENST00000551316 PRSS41Q7RTY9 318 aa12.57□□□□□ -0.4
SNRPF-203ENST00000551316 CLDN19Q8N6F1 224 aa12.57□□□□□ -0.4
SNRPF-203ENST00000551316 HORMAD2Q8N7B1 307 aa12.57□□□□□ -0.4
SNRPF-203ENST00000551316 CCNYQ8ND76 341 aa12.57□□□□□ -0.4
SNRPF-203ENST00000551316 FAM71BQ8TC56 605 aa12.57□□□□□ -0.4
SNRPF-203ENST00000551316 ROBO4Q8WZ75 1007 aa12.57□□□□□ -0.4
SNRPF-203ENST00000551316 BTBD6Q96KE9 485 aa12.57□□□□□ -0.4
SNRPF-203ENST00000551316 CYTH2Q99418 400 aa12.57□□□□□ -0.4
SNRPF-203ENST00000551316 SYT11Q9BT88 431 aa12.57□□□□□ -0.4
SNRPF-203ENST00000551316 ZDHHC11Q9H8X9 412 aa12.57□□□□□ -0.4
SNRPF-203ENST00000551316 PARVAQ9NVD7 372 aa12.57□□□□□ -0.4
SNRPF-203ENST00000551316 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.57□□□□□ -0.4
SNRPF-203ENST00000551316 KLF13Q9Y2Y9 288 aaPredicted RBP12.57□□□□□ -0.4
SNRPF-203ENST00000551316 FREM3P0C091 2139 aa12.56□□□□□ -0.4
SNRPF-203ENST00000551316 YLPM1P49750 1951 aaKnown RBP12.56□□□□□ -0.4
SNRPF-203ENST00000551316 AGAP14A8MT82 685 aa12.56□□□□□ -0.4
SNRPF-203ENST00000551316 NDC80O14777 642 aa12.56□□□□□ -0.4
SNRPF-203ENST00000551316 P2RX6O15547 441 aa12.56□□□□□ -0.4
SNRPF-203ENST00000551316 ATP1B2P14415 290 aaPredicted RBP12.56□□□□□ -0.4
SNRPF-203ENST00000551316 CYB561P49447 251 aa12.56□□□□□ -0.4
SNRPF-203ENST00000551316 PDLIM3Q53GG5 364 aaPredicted RBP12.56□□□□□ -0.4
SNRPF-203ENST00000551316 CCDC183Q5T5S1 534 aa12.56□□□□□ -0.4
SNRPF-203ENST00000551316 TBC1D21Q8IYX1 336 aa12.56□□□□□ -0.4
SNRPF-203ENST00000551316 SLC5A8Q8N695 610 aa12.56□□□□□ -0.4
SNRPF-203ENST00000551316 TNIP2Q8NFZ5 429 aa12.56□□□□□ -0.4
SNRPF-203ENST00000551316 M1APQ8TC57 530 aa12.56□□□□□ -0.4
SNRPF-203ENST00000551316 SLC25A51Q9H1U9 297 aa12.56□□□□□ -0.4
SNRPF-203ENST00000551316 UBTD1Q9HAC8 227 aa12.56□□□□□ -0.4
SNRPF-203ENST00000551316 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.56□□□□□ -0.4
SNRPF-203ENST00000551316 B4GALT7Q9UBV7 327 aa12.56□□□□□ -0.4
SNRPF-203ENST00000551316 PRSS21Q9Y6M0 314 aa12.56□□□□□ -0.4
SNRPF-203ENST00000551316 PES1O00541 588 aaKnown RBP12.55□□□□□ -0.4
SNRPF-203ENST00000551316 CD5LO43866 347 aa12.55□□□□□ -0.4
SNRPF-203ENST00000551316 PPIDQ08752 370 aaKnown RBP12.55□□□□□ -0.4
SNRPF-203ENST00000551316 KRT81Q14533 505 aa12.55□□□□□ -0.4
SNRPF-203ENST00000551316 MINDY4Q4G0A6 757 aa12.55□□□□□ -0.4
SNRPF-203ENST00000551316 CCDC122Q5T0U0 273 aa12.55□□□□□ -0.4
SNRPF-203ENST00000551316 RPS19BP1Q86WX3 136 aaKnown RBP12.55□□□□□ -0.4
SNRPF-203ENST00000551316 IGFBPL1Q8WX77 278 aa12.55□□□□□ -0.4
SNRPF-203ENST00000551316 TSLPQ969D9 159 aa12.55□□□□□ -0.4
SNRPF-203ENST00000551316 PIGTQ969N2 578 aa12.55□□□□□ -0.4
SNRPF-203ENST00000551316 TIGD1Q96MW7 591 aa12.55□□□□□ -0.4
SNRPF-203ENST00000551316 MIPEPQ99797 713 aa12.55□□□□□ -0.4
SNRPF-203ENST00000551316 RBCK1Q9BYM8 510 aa12.55□□□□□ -0.4
SNRPF-203ENST00000551316 GSX2Q9BZM3 304 aa12.55□□□□□ -0.4
SNRPF-203ENST00000551316 C6orf203Q9P0P8 240 aaPredicted RBP12.55□□□□□ -0.4
SNRPF-203ENST00000551316 SPRR3Q9UBC9 169 aa12.55□□□□□ -0.4
SNRPF-203ENST00000551316 FAM169AQ9Y6X4 670 aa12.55□□□□□ -0.4
SNRPF-203ENST00000551316 IGLV3-16A0A075B6K0 115 aa12.54□□□□□ -0.4
SNRPF-203ENST00000551316 LOC285095A0A1B0GVY8 99 aa12.54□□□□□ -0.4
SNRPF-203ENST00000551316 G3V3Y1 287 aa12.54□□□□□ -0.4
SNRPF-203ENST00000551316 H0YGG7 62 aa12.54□□□□□ -0.4
SNRPF-203ENST00000551316 AP2A1O95782 977 aa12.54□□□□□ -0.4
SNRPF-203ENST00000551316 CD68P34810 354 aaPredicted RBP12.54□□□□□ -0.4
SNRPF-203ENST00000551316 TRHRP34981 398 aaPredicted RBP12.54□□□□□ -0.4
SNRPF-203ENST00000551316 HLCSP50747 726 aa12.54□□□□□ -0.4
SNRPF-203ENST00000551316 AGFG1P52594 562 aaKnown RBP12.54□□□□□ -0.4
SNRPF-203ENST00000551316 ZNF136P52737 540 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms