RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 FFAR3O14843 346 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 GPR42O15529 346 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 SYF2O95926 243 aaKnown RBP12.41□□□□□ -0.42
NPAS3-209ENST00000551008 STATHP02808 62 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 EIF2S1P05198 315 aaKnown RBP12.41□□□□□ -0.42
NPAS3-209ENST00000551008 FDXRP22570 491 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 MMP11P24347 488 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 HSD17B2P37059 387 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 SOX8P57073 446 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 TBPL1P62380 186 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 RELAQ04206 551 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 Q0VFX4 171 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 TSTA3Q13630 321 aaPredicted RBP12.41□□□□□ -0.42
NPAS3-209ENST00000551008 MYBPC3Q14896 1274 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 SLC6A19Q695T7 634 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 ANKMY2Q8IV38 441 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 LINGO1Q96FE5 620 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 IP6K3Q96PC2 410 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 NAT9Q9BTE0 207 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 TRIM31Q9BZY9 425 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 SMYD2Q9NRG4 433 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 GPR83Q9NYM4 423 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 LUZP4Q9P127 313 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 FBXL4Q9UKA2 621 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 ZNF451Q9Y4E5 1061 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 PCDHGB7Q9Y5F8 929 aa12.41□□□□□ -0.42
NPAS3-209ENST00000551008 ICE1Q9Y2F5 2266 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 H7BY64 318 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 CCDC188H7C350 402 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 AGPSO00116 658 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 ZBTB14O43829 449 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 C1QAP02745 245 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 EZRP15311 586 aaKnown RBP12.4□□□□□ -0.42
NPAS3-209ENST00000551008 EMP3P54852 163 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 RRADP55042 308 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 CSNK1G2P78368 415 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 FRG1Q14331 258 aaKnown RBP12.4□□□□□ -0.42
NPAS3-209ENST00000551008 HIF1AQ16665 826 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 FAM214AQ32MH5 1076 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 VWA2Q5GFL6 755 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 VWA5B1Q5TIE3 1220 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 HECTD2Q5U5R9 776 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 JMJD6Q6NYC1 403 aaPredicted RBP12.4□□□□□ -0.42
NPAS3-209ENST00000551008 LAPTM4BQ86VI4 370 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 PDIK1LQ8N165 341 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 GALNT16Q8N428 558 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 CSNK1A1LQ8N752 337 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 OR11G2Q8NGC1 345 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 STT3BQ8TCJ2 826 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 LRRC39Q96DD0 335 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 SNF8Q96H20 258 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 PRAP1Q96NZ9 151 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 KRT12Q99456 494 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 SGPP1Q9BX95 441 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 MFRPQ9BY79 579 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 ZNF304Q9HCX3 659 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 ABCF3Q9NUQ8 709 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 TAS2R13Q9NYV9 303 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 MOCS1Q9NZB8 636 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 SNX24Q9Y343 169 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 CSAG2Q9Y5P2 127 aa12.4□□□□□ -0.42
NPAS3-209ENST00000551008 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.4□□□□□ -0.42
NPAS3-209ENST00000551008 UTP20O75691 2785 aaKnown RBP12.39□□□□□ -0.43
NPAS3-209ENST00000551008 PIAS1O75925 651 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 CCNDBP1O95273 360 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 CD63P08962 238 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 ZGLP1P0C6A0 271 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 UQCRFS1P47985 274 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 ABATP80404 500 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 KLC1Q07866 573 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 SP140Q13342 867 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 NAA25Q14CX7 972 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 SYT16Q17RD7 645 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 MUM1Q2TAK8 710 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 PRAMEF13Q5VWM6 474 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 PRMT9Q6P2P2 845 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 AGTRAPQ6RW13 159 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 SBSNQ6UWP8 590 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 PRSS41Q7RTY9 318 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 ZC3HC1Q86WB0 502 aaKnown RBP12.39□□□□□ -0.43
NPAS3-209ENST00000551008 PRSS58Q8IYP2 241 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 FBXO36Q8NEA4 188 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 FER1L6-AS2Q96M78 137 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 RUNDC3BQ96NL0 473 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 OR4K3Q96R72 315 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 MACROD1Q9BQ69 325 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 ATG10Q9H0Y0 220 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 PARVBQ9HBI1 364 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 CCDC177Q9NQR7 707 aaPredicted RBP12.39□□□□□ -0.43
NPAS3-209ENST00000551008 GRHL1Q9NZI5 618 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 MAP4K5Q9Y4K4 846 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 SVILO95425 2214 aa12.39□□□□□ -0.43
NPAS3-209ENST00000551008 POLEQ07864 2286 aa12.38□□□□□ -0.43
NPAS3-209ENST00000551008 A0A1W2PQ72 361 aa12.38□□□□□ -0.43
NPAS3-209ENST00000551008 CTAGE15A4D2H0 777 aa12.38□□□□□ -0.43
NPAS3-209ENST00000551008 ZNF839A8K0R7 811 aa12.38□□□□□ -0.43
NPAS3-209ENST00000551008 EFCAB8A8MWE9 144 aa12.38□□□□□ -0.43
NPAS3-209ENST00000551008 PEX12O00623 359 aa12.38□□□□□ -0.43
NPAS3-209ENST00000551008 SLC16A5O15375 505 aa12.38□□□□□ -0.43
NPAS3-209ENST00000551008 RAD51CO43502 376 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms