RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 LBX2Q6XYB7 198 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 GOLGA7Q7Z5G4 137 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 CACUL1Q86Y37 369 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 OR4C6Q8NH72 309 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 FRG2BQ96QU4 278 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 TMED9Q9BVK6 235 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 RSPH9Q9H1X1 276 aaPredicted RBP15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 A0A1B0GVM2 712 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 KANTRA0A1W2PQU2 76 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 NME4O00746 187 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 KIAA0513O60268 411 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 HNRNPFP52597 415 aaKnown RBP15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 GRIK2Q13002 908 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 FNDC3BQ53EP0 1204 aaKnown RBP15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 LRRC66Q68CR7 880 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 TIGD4Q8IY51 512 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 SH3YL1Q96HL8 342 aaPredicted RBP15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 CALML5Q9NZT1 146 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 MARK1Q9P0L2 795 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 PCDH10Q9P2E7 1040 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 MSRAQ9UJ68 235 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 OR2AG2A6NM03 316 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 GLUD1P00367 558 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 ELFN1P0C7U0 828 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 CDK6Q00534 326 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 CD47Q08722 323 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 ATP13A5Q4VNC0 1218 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 KLHL24Q6TFL4 600 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 MMAAQ8IVH4 418 aaKnown RBP15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 PIAS4Q8N2W9 510 aaPredicted RBP15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 JPH3Q8WXH2 748 aaPredicted RBP15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 PPP1R16AQ96I34 528 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 CNDP2Q96KP4 475 aaKnown RBP15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 TBX5Q99593 518 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 CCDC32Q9BV29 185 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 SLC32A1Q9H598 525 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 SYNDIG1Q9H7V2 258 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 ELL3Q9HB65 397 aaPredicted RBP15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 DNAJC27Q9NZQ0 273 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 URADA6NGE7 173 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 OR2AT4A6NND4 320 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 PDCD5O14737 125 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 GNB5O14775 395 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 ADAM8P78325 824 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 ATG9BQ674R7 924 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 PNCKQ6P2M8 343 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 ARL9Q6T311 187 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 HFE2Q6ZVN8 426 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 WDTC1Q8N5D0 677 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 SLC9A6Q92581 669 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 ALPK1Q96QP1 1244 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 MAF1Q9H063 256 aa15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 MRM3Q9HC36 420 aaKnown RBP15.38■□□□□ 0.05
RBFOX1-212ENST00000550418 TRAV6A0A075B6T7 132 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 LOC730098B7Z3J9 87 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 SOCS7O14512 581 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 CORO1AP31146 461 aaKnown RBP15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 SMSP52788 366 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 STC1P52823 247 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 TSPAN5P62079 268 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 DUSP4Q13115 394 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 FBXO42Q6P3S6 717 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 PAMR1Q6UXH9 720 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 CXorf40AQ8TE69 158 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 CAMK1GQ96NX5 476 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 NPY6RQ99463 290 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 DHRS4Q9BTZ2 278 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 TCF7L1Q9HCS4 588 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 UBQLN2Q9UHD9 624 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 RIMS3Q9UJD0 308 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 B3GNT3Q9Y2A9 372 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 CPQQ9Y646 472 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 MANBAO00462 879 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 EEDO75530 441 aaKnown RBP15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 ATE1O95260 518 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 GSTM3P21266 225 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 RGS1Q08116 209 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 C4orf46Q504U0 113 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 CYBRD1Q53TN4 286 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 COQ5Q5HYK3 327 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 CLEC12AQ5QGZ9 265 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 UBE2UQ5VVX9 321 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 DEFB118Q96PH6 123 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 RANBP3Q9H6Z4 567 aaPredicted RBP15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 MRPL17Q9NRX2 175 aaKnown RBP15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 AIG1Q9NVV5 245 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 KIAA1522Q9P206 1035 aaPredicted RBP15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 TNFRSF10DQ9UBN6 386 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 ZNF69Q9UC07 566 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 HSPE1-MOB4S4R3N1 261 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 C9IYK1 514 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 HAS3O00219 553 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 SLC9A3R1O14745 358 aaPredicted RBP15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 ANXA3P12429 323 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 DSTNP60981 165 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 INCA1Q0VD86 236 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 MPPE1Q53F39 396 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 KDM1BQ8NB78 822 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 TSEN15Q8WW01 171 aaKnown RBP15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 SLC35G5Q96KT7 338 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms