RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 PHGDHO43175 533 aaKnown RBP9.33□□□□□ -0.92
HDAC7-229ENST00000549883 SLC28A2O43868 658 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 LCMT2O60294 686 aaKnown RBP9.33□□□□□ -0.92
HDAC7-229ENST00000549883 SRPX2O60687 465 aaPredicted RBP9.33□□□□□ -0.92
HDAC7-229ENST00000549883 RFPL1O75677 317 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 GUCA1CO95843 209 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 NPPBP16860 134 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 HSD17B2P37059 387 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 MAGEA4P43358 317 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 CSNK1G2P78368 415 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 MEF2AQ02078 507 aaPredicted RBP9.33□□□□□ -0.92
HDAC7-229ENST00000549883 GUCY2DQ02846 1103 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 SP140Q13342 867 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 RAPSNQ13702 412 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 PPP1R3AQ16821 1122 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 SYT16Q17RD7 645 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 PRAMEF13Q5VWM6 474 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 C3orf62Q6ZUJ4 267 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 VN1R4Q7Z5H5 301 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 PPP1R32Q7Z5V6 425 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 ADCK2Q7Z695 626 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 MRGPREQ86SM8 312 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 CTAGE6Q86UF2 777 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 SLC26A11Q86WA9 606 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 APLFQ8IW19 511 aaPredicted RBP9.33□□□□□ -0.92
HDAC7-229ENST00000549883 PRSS58Q8IYP2 241 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 CSNK1A1LQ8N752 337 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 TTC29Q8NA56 475 aaPredicted RBP9.33□□□□□ -0.92
HDAC7-229ENST00000549883 SPSB2Q99619 263 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 SGPP1Q9BX95 441 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 ING2Q9H160 280 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 SPNS1Q9H2V7 528 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 RHOJQ9H4E5 214 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 SOX17Q9H6I2 414 aaPredicted RBP9.33□□□□□ -0.92
HDAC7-229ENST00000549883 LRRC4CQ9HCJ2 640 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 CCDC177Q9NQR7 707 aaPredicted RBP9.33□□□□□ -0.92
HDAC7-229ENST00000549883 ARL15Q9NXU5 204 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 GPN3Q9UHW5 284 aaPredicted RBP9.33□□□□□ -0.92
HDAC7-229ENST00000549883 TUBD1Q9UJT1 453 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 UTP11Q9Y3A2 253 aaKnown RBP9.33□□□□□ -0.92
HDAC7-229ENST00000549883 BSNQ9UPA5 3926 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 EIF3HO15372 352 aaKnown RBP eCLIP9.32□□□□□ -0.92
HDAC7-229ENST00000549883 SUV39H1O43463 412 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 FOXS1O43638 330 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 ONECUT2O95948 504 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 CDH1P12830 882 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 BCL6P41182 706 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 FOLR3P41439 243 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 EFNA3P52797 238 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 ARSFP54793 590 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 ABATP80404 500 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 MAT1AQ00266 395 aaKnown RBP9.32□□□□□ -0.92
HDAC7-229ENST00000549883 TSNQ15631 228 aaKnown RBP9.32□□□□□ -0.92
HDAC7-229ENST00000549883 NKG7Q16617 165 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 KBTBD12Q3ZCT8 623 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 LACTB2Q53H82 288 aaPredicted RBP9.32□□□□□ -0.92
HDAC7-229ENST00000549883 FBXO48Q5FWF7 155 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 VWA2Q5GFL6 755 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 TCTE1Q5JU00 501 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 CATSPEREQ5SY80 951 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 LRRC8EQ6NSJ5 796 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 C8orf74Q6P047 294 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 OVCH1Q7RTY7 1134 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 PRSS41Q7RTY9 318 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 LAPTM4BQ86VI4 370 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 AMER3Q8N944 861 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 ZNF740Q8NDX6 193 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 OR2Y1Q8NGV0 311 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 OR56A3Q8NH54 315 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 GABPB2Q8TAK5 448 aaPredicted RBP9.32□□□□□ -0.92
HDAC7-229ENST00000549883 FBF1Q8TES7 1133 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 THAP4Q8WY91 577 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 PDLIM5Q96HC4 596 aaKnown RBP9.32□□□□□ -0.92
HDAC7-229ENST00000549883 CABS1Q96KC9 395 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 RBBP8Q99708 897 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 FAM117AQ9C073 453 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 RAB17Q9H0T7 212 aa9.32□□□□□ -0.92
HDAC7-229ENST00000549883 CORO1CQ9ULV4 474 aaPredicted RBP9.32□□□□□ -0.92
HDAC7-229ENST00000549883 HELZ2Q9BYK8 2649 aaKnown RBP9.31□□□□□ -0.92
HDAC7-229ENST00000549883 A0A0A6YYC8 382 aaPredicted RBP9.31□□□□□ -0.92
HDAC7-229ENST00000549883 VSTM2BA6NLU5 285 aa9.31□□□□□ -0.92
HDAC7-229ENST00000549883 ZNF839A8K0R7 811 aa9.31□□□□□ -0.92
HDAC7-229ENST00000549883 I3L1I5 382 aaPredicted RBP9.31□□□□□ -0.92
HDAC7-229ENST00000549883 DNAJB6O75190 326 aa9.31□□□□□ -0.92
HDAC7-229ENST00000549883 CCNDBP1O95273 360 aa9.31□□□□□ -0.92
HDAC7-229ENST00000549883 B3GALT4O96024 378 aa9.31□□□□□ -0.92
HDAC7-229ENST00000549883 SFTPCP11686 197 aa9.31□□□□□ -0.92
HDAC7-229ENST00000549883 EZRP15311 586 aaKnown RBP9.31□□□□□ -0.92
HDAC7-229ENST00000549883 GDF5P43026 501 aa9.31□□□□□ -0.92
HDAC7-229ENST00000549883 CKAP4Q07065 602 aaKnown RBP9.31□□□□□ -0.92
HDAC7-229ENST00000549883 DLG1Q12959 904 aa9.31□□□□□ -0.92
HDAC7-229ENST00000549883 SSPNQ14714 243 aa9.31□□□□□ -0.92
HDAC7-229ENST00000549883 WHAMMP3Q1A5X7 153 aa9.31□□□□□ -0.92
HDAC7-229ENST00000549883 FAM214AQ32MH5 1076 aa9.31□□□□□ -0.92
HDAC7-229ENST00000549883 LCTLQ6UWM7 567 aa9.31□□□□□ -0.92
HDAC7-229ENST00000549883 ASB18Q6ZVZ8 466 aa9.31□□□□□ -0.92
HDAC7-229ENST00000549883 CMC1Q7Z7K0 106 aa9.31□□□□□ -0.92
HDAC7-229ENST00000549883 CTAGE3PQ8IX95 158 aa9.31□□□□□ -0.92
HDAC7-229ENST00000549883 MMGT1Q8N4V1 131 aa9.31□□□□□ -0.92
HDAC7-229ENST00000549883 PPM1NQ8N819 430 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms