RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 ZNF551Q7Z340 670 aaPredicted RBP13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 DCP2Q8IU60 420 aaKnown RBP13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 NLGN4XQ8N0W4 816 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 MMP21Q8N119 569 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 CLIP4Q8N3C7 705 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 OR4A15Q8NGL6 344 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 ASZ1Q8WWH4 475 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 MBOAT4Q96T53 435 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 CCL27Q9Y4X3 112 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 TMEM247A6NEH6 219 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 ARHGEF33A8MVX0 844 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 LATO43561 262 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 SCELO95171 688 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 CHI3L1P36222 383 aaPredicted RBP13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 EMP3P54852 163 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 GRIK2Q13002 908 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 MTA1Q13330 715 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 CPTPQ5TA50 214 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 EGFLAMQ63HQ2 1017 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 RAET1GQ6H3X3 334 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 PLD3Q8IV08 490 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 KLHL23Q8NBE8 558 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 ISG20Q96AZ6 181 aaKnown RBP13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 PLEKHA8Q96JA3 519 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 SAMD11Q96NU1 681 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 C1QTNF3Q9BXJ4 246 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 DCAF13Q9NV06 445 aaKnown RBP13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 DNAAF2Q9NVR5 837 aaKnown RBP13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 TRNAU1APQ9NX07 287 aaKnown RBP13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 DAPK2Q9UIK4 370 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 RAB23Q9ULC3 237 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 PATJQ8NI35 1801 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 CKAP5Q14008 2032 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 PNMA8CA0A1B0GUJ8 204 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 LZTS3O60299 673 aaPredicted RBP13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 ETFAP13804 333 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 HTR1BP28222 390 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 CDH12P55289 794 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 DNASE1L3Q13609 305 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 TP53BP2Q13625 1128 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 ZNF852Q6ZMS4 543 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 MACC1Q6ZN28 852 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 SLC39A11Q8N1S5 342 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 CIDECQ96AQ7 238 aaPredicted RBP13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 DUSP26Q9BV47 211 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 OSBPL10Q9BXB5 764 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 C6orf62Q9GZU0 229 aaPredicted RBP13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 MUC13Q9H3R2 512 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 ITM2CQ9NQX7 267 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 TMPRSS11EQ9UL52 423 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 TMEM98Q9Y2Y6 226 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 ARID1BQ8NFD5 2236 aaPredicted RBP13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 ARNTLO00327 626 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 ABCB7O75027 752 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 FABP3P05413 133 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 LCKP06239 509 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 PTNP21246 168 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 RRM2P31350 389 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 MLLT10P55197 1068 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 TRIM16LQ309B1 348 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 OR2T5Q6IEZ7 315 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 OR2T29Q8NH02 315 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 OR5K1Q8NHB7 308 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 NDNFQ8TB73 568 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 PROX1Q92786 737 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 KLK6Q92876 244 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 FOPNLQ96NB1 174 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 CSF3RQ99062 836 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 OSGEPL1Q9H4B0 414 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 SCN3BQ9NY72 215 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 OGDHLQ9ULD0 1010 aa13.23□□□□□ -0.29
PRPF40B-209ENST00000548825 YY2O15391 372 aa13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 NDUFS2O75306 463 aa13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 DBTP11182 482 aaKnown RBP13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 CD22P20273 847 aa13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 SEPHS1P49903 392 aa13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 CLDN8P56748 225 aa13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 RAB33AQ14088 237 aa13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 NAGSQ8N159 534 aa13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 C12orf76Q8N812 135 aaPredicted RBP13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 PAK1IP1Q9NWT1 392 aaPredicted RBP13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 MICAL3Q7RTP6 2002 aa13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 H3BM21 787 aa13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 K7ESM1 405 aa13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 GRM6O15303 877 aa13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 ERN1O75460 977 aaKnown RBP13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 CAPNS1P04632 268 aa13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 UGT8Q16880 541 aa13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 BORAQ6PGQ7 559 aa13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 ELMSAN1Q6PJG2 1045 aa13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 GRASPQ7Z6J2 395 aaPredicted RBP13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 GLB1L3Q8NCI6 653 aaPredicted RBP13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 TBC1D15Q8TC07 691 aa13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 ASB11Q8WXH4 323 aa13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 TSEN34Q9BSV6 310 aaKnown RBP13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 THUMPD1Q9NXG2 353 aaKnown RBP13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 LMCD1Q9NZU5 365 aa13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 TRPS1Q9UHF7 1281 aa13.22□□□□□ -0.29
PRPF40B-209ENST00000548825 KLHL33A6NCF5 533 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 PCDH7O60245 1069 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms