RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 AMIGO1Q86WK6 493 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 PLXDC1Q8IUK5 500 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 SYTL1Q8IYJ3 562 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 TCAIMQ8N3R3 496 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 OR4E2Q8NGC2 313 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 MGARPQ8TDB4 240 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 DENND1AQ8TEH3 1009 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 FBXL8Q96CD0 374 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 TBC1D10AQ9BXI6 508 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 SRMSQ9H3Y6 488 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 UCK1Q9HA47 277 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 ABCF3Q9NUQ8 709 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 NKIRAS1Q9NYS0 192 aa11.64□□□□□ -0.55
HDAC7-226ENST00000547259 A8MT66 165 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 H3BQF6 201 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 POLR1CO15160 346 aaPredicted RBP11.63□□□□□ -0.55
HDAC7-226ENST00000547259 MTHFD2P13995 350 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 CPA3P15088 417 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 NR1D1P20393 614 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 ATP5F1P24539 256 aaPredicted RBP11.63□□□□□ -0.55
HDAC7-226ENST00000547259 IMPA1P29218 277 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 HSD17B2P37059 387 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 HNMTP50135 292 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 ALDH18A1P54886 795 aaKnown RBP11.63□□□□□ -0.55
HDAC7-226ENST00000547259 PPP2R2AP63151 447 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 SRSF1Q07955 248 aaKnown RBP eCLIP11.63□□□□□ -0.554e-8■□□□□ 8.9
HDAC7-226ENST00000547259 ARHGAP19Q14CB8 494 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 PFKFB4Q16877 469 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 CDKL4Q5MAI5 379 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 HHATQ5VTY9 493 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 AGTRAPQ6RW13 159 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 ZYG11AQ6WRX3 759 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 OOSP2Q86WS3 158 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 C2orf73Q8N5S3 287 aaPredicted RBP11.63□□□□□ -0.55
HDAC7-226ENST00000547259 ESX1Q8N693 406 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 PTGR2Q8N8N7 351 aaPredicted RBP11.63□□□□□ -0.55
HDAC7-226ENST00000547259 PPFIBP2Q8ND30 876 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 OR2L8Q8NGY9 312 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 ZNF480Q8WV37 535 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 RHBDF1Q96CC6 855 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 NRTNQ99748 197 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 PAIP2Q9BPZ3 127 aaKnown RBP11.63□□□□□ -0.55
HDAC7-226ENST00000547259 MENTQ9BUN1 341 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 ATG10Q9H0Y0 220 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 CNOT10Q9H9A5 744 aaKnown RBP11.63□□□□□ -0.55
HDAC7-226ENST00000547259 MLXIPLQ9NP71 852 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 OCIAD1Q9NX40 245 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 COPG2Q9UBF2 871 aa11.63□□□□□ -0.55
HDAC7-226ENST00000547259 TMEM184BQ9Y519 407 aaPredicted RBP11.63□□□□□ -0.55
HDAC7-226ENST00000547259 PRRC2CQ9Y520 2896 aaKnown RBP11.63□□□□□ -0.55
HDAC7-226ENST00000547259 NOTCH2Q04721 2471 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 OR6C74A6NCV1 312 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 TARM1B6A8C7 271 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 G3V2L1 256 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 KLK8O60259 260 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 DLX3O60479 287 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 IPO13O94829 963 aaKnown RBP11.62□□□□□ -0.55
HDAC7-226ENST00000547259 UBXN7O94888 489 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 ERGP11308 486 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 AMD1P17707 334 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 TCN2P20062 427 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 CSF2RBP32927 897 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 HSPA7P48741 367 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 SLC18A1P54219 525 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 TBPL1P62380 186 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 PRKAA1Q13131 559 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 MPP2Q14168 576 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 PCLAFQ15004 111 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 SETDB1Q15047 1291 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 CYP2A13Q16696 494 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 C18orf21Q32NC0 220 aaPredicted RBP11.62□□□□□ -0.55
HDAC7-226ENST00000547259 FBXO48Q5FWF7 155 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 THEMIS2Q5TEJ8 643 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 ARMC6Q6NXE6 501 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 KLHL35Q6PF15 583 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 PTRH1Q86Y79 214 aaKnown RBP11.62□□□□□ -0.55
HDAC7-226ENST00000547259 SLC22A9Q8IVM8 553 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 TMEM151AQ8N4L1 468 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 BMPERQ8N8U9 685 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 LMNTD1Q8N9Z9 388 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 LINC01555Q8NAE3 123 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 UBTD2Q8WUN7 234 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 SREK1Q8WXA9 508 aaKnown RBP11.62□□□□□ -0.55
HDAC7-226ENST00000547259 SMPDL3AQ92484 453 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 NCSTNQ92542 709 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 CCDC126Q96EE4 140 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 PHF21BQ96EK2 531 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 TMEM79Q9BSE2 394 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 SPRY4Q9C004 299 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 CCDC177Q9NQR7 707 aaPredicted RBP11.62□□□□□ -0.55
HDAC7-226ENST00000547259 OR6C2Q9NZP2 312 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 ANKMY1Q9P2S6 941 aa11.62□□□□□ -0.55
HDAC7-226ENST00000547259 USP9XQ93008 2570 aaPredicted RBP11.61□□□□□ -0.55
HDAC7-226ENST00000547259 PCM1Q15154 2024 aa11.61□□□□□ -0.55
HDAC7-226ENST00000547259 PIPSLA2A3N6 862 aa11.61□□□□□ -0.55
HDAC7-226ENST00000547259 GSAPA4D1B5 854 aa11.61□□□□□ -0.55
HDAC7-226ENST00000547259 OR5K3A6NET4 321 aa11.61□□□□□ -0.55
HDAC7-226ENST00000547259 ISM1B1AKI9 464 aa11.61□□□□□ -0.55
HDAC7-226ENST00000547259 E7ENX8 843 aa11.61□□□□□ -0.55
HDAC7-226ENST00000547259 STX16-NPEPL1H3BU86 382 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms