RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 H7BY64 318 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 MAP3K7O43318 606 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 ULK1O75385 1050 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 CD59P13987 128 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 DRD4P21917 467 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 CDH3P22223 829 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 CBX1P83916 185 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 SLBPQ14493 270 aaKnown RBP eCLIP15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 ZRSR2Q15696 482 aaKnown RBP15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 CPSF6Q16630 551 aaKnown RBP eCLIP15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 CATSPEREQ5SY80 951 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 FRG2Q64ET8 278 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 CLEC6AQ6EIG7 209 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 TMIGD1Q6UXZ0 262 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 ATG14Q6ZNE5 492 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 ADCK2Q7Z695 626 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 FAM129CQ86XR2 697 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 NAXDQ8IW45 347 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 DCBLD1Q8N8Z6 715 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 Q8N9G6 341 aaPredicted RBP15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 WDR48Q8TAF3 677 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 FLVCR1-AS1Q8TAF5 88 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 NCSTNQ92542 709 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 SEC16BQ96JE7 1060 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 PRAP1Q96NZ9 151 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 FRG2BQ96QU4 278 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 PLCD4Q9BRC7 762 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 FAM107BQ9H098 131 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 PARD6AQ9NPB6 346 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 C1GALT1Q9NS00 363 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 GEMIN8Q9NWZ8 242 aaKnown RBP15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 KLHL14Q9P2G3 628 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 MARCOQ9UEW3 520 aaPredicted RBP15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 BTBD3Q9Y2F9 522 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 FIS1Q9Y3D6 152 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 DNAJC15Q9Y5T4 150 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 USH1CQ9Y6N9 552 aa15.23■□□□□ 0.03
TRAFD1-203ENST00000547063 KCNE1BA0A087WTH5 132 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 A0A1B0GTL3 188 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 TRBC2A0A5B9 178 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 C4orf47A7E2U8 309 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 CAPN5O15484 640 aaPredicted RBP15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 B4GAT1O43505 415 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 EZRP15311 586 aaKnown RBP15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 ALOX15P16050 662 aaPredicted RBP15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 TGM1P22735 817 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 ACP1P24666 158 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 VARSP26640 1264 aaKnown RBP15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 GRIA3P42263 894 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 CSNK1G2P78368 415 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 REEP5Q00765 189 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 UGT3A2Q3SY77 523 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 KIAA1614Q5VZ46 1190 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 ZNF425Q6IV72 752 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 LAS2Q8IYD9 372 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 IFI44Q8TCB0 444 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 TWIST2Q8WVJ9 160 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 STON2Q8WXE9 905 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 THAP11Q96EK4 314 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 CCT8L2Q96SF2 557 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 CCDC3Q9BQI4 270 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 SARGQ9BW04 601 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 ABCG4Q9H172 646 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 SEMA6CQ9H3T2 930 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 NPHS2Q9NP85 383 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 SLC6A20Q9NP91 592 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 CUEDC1Q9NWM3 386 aaPredicted RBP15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 SH2B3Q9UQQ2 575 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 APOBEC2Q9Y235 224 aaKnown RBP15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 TIMM22Q9Y584 194 aa15.22■□□□□ 0.03
TRAFD1-203ENST00000547063 MN1Q10571 1320 aaPredicted RBP15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 SERTM1A2A2V5 107 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 OR2A25A4D2G3 310 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 TMEM233B4DJY2 109 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 MANBAO00462 879 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 FFAR3O14843 346 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 TOX3O15405 576 aaPredicted RBP15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 GPR42O15529 346 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 PRAMEF4O60810 478 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 VPS4BO75351 444 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 CPNE6O95741 557 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 C9P02748 559 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 MYF5P13349 255 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 HSD3B1P14060 373 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 CD22P20273 847 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 MAGP20916 626 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 HSD3B2P26439 372 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 CD1CP29017 333 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 PIK3CBP42338 1070 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 FOXA1P55317 472 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 RPS15AP62244 130 aaKnown RBP15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 AMZ1Q400G9 498 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 PERM1Q5SV97 790 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 GKAP1Q5VSY0 366 aaPredicted RBP15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 PRAMEF9Q5VWM5 478 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 FIGLAQ6QHK4 219 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 SPATA21Q7Z572 469 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 DDIASQ8IXT1 998 aa15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 GBP7Q8N8V2 638 aaPredicted RBP15.21■□□□□ 0.03
TRAFD1-203ENST00000547063 OR7G3Q8NG95 312 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms