RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 PRMT9Q6P2P2 845 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 SBSNQ6UWP8 590 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 TMEM207Q6UWW9 146 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 CEP128Q6ZU80 1094 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 ZNF605Q86T29 641 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 C17orf64Q86WR6 236 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 OR4N4Q8N0Y3 316 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 RERGQ96A58 199 aaPredicted RBP15.18■□□□□ 0.02
DDX54-204ENST00000546898 FBXL8Q96CD0 374 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 TRIM44Q96DX7 344 aaPredicted RBP15.18■□□□□ 0.02
DDX54-204ENST00000546898 MVB12AQ96EY5 273 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 TSPAN17Q96FV3 270 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 ABHD17AQ96GS6 310 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 OR2A5Q96R48 311 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 GPR22Q99680 433 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 HAUS8Q9BT25 410 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 ATG10Q9H0Y0 220 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 WDR54Q9H977 334 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 GPAMQ9HCL2 828 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 SLC22A11Q9NSA0 550 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 NXT1Q9UKK6 140 aaKnown RBP15.18■□□□□ 0.02
DDX54-204ENST00000546898 PTRH2Q9Y3E5 179 aaKnown RBP15.18■□□□□ 0.02
DDX54-204ENST00000546898 HEMK1Q9Y5R4 338 aaPredicted RBP15.18■□□□□ 0.02
DDX54-204ENST00000546898 GCN1Q92616 2671 aaKnown RBP15.17■□□□□ 0.02
DDX54-204ENST00000546898 CTAGE15A4D2H0 777 aa15.17■□□□□ 0.02
DDX54-204ENST00000546898 ARGFXA6NJG6 315 aa15.17■□□□□ 0.02
DDX54-204ENST00000546898 CXorf49A8MYA2 514 aaPredicted RBP15.17■□□□□ 0.02
DDX54-204ENST00000546898 HAT1O14929 419 aa15.17■□□□□ 0.02
DDX54-204ENST00000546898 C1QAP02745 245 aa15.17■□□□□ 0.02
DDX54-204ENST00000546898 EIF2S1P05198 315 aaKnown RBP15.17■□□□□ 0.02
DDX54-204ENST00000546898 CTAGE8P0CG41 777 aa15.17■□□□□ 0.02
DDX54-204ENST00000546898 RRADP55042 308 aa15.17■□□□□ 0.02
DDX54-204ENST00000546898 RPS15AP62244 130 aaKnown RBP15.17■□□□□ 0.02
DDX54-204ENST00000546898 ZNF460Q14592 562 aa15.17■□□□□ 0.02
DDX54-204ENST00000546898 PPP1R3AQ16821 1122 aa15.17■□□□□ 0.02
DDX54-204ENST00000546898 GARNL3Q5VVW2 1013 aa15.17■□□□□ 0.02
DDX54-204ENST00000546898 OVCH1Q7RTY7 1134 aa15.17■□□□□ 0.02
DDX54-204ENST00000546898 ADAMTSL2Q86TH1 951 aa15.17■□□□□ 0.02
DDX54-204ENST00000546898 CTAGE6Q86UF2 777 aa15.17■□□□□ 0.02
DDX54-204ENST00000546898 CTAGE4Q8IX94 777 aa15.17■□□□□ 0.02
DDX54-204ENST00000546898 CSNK1A1LQ8N752 337 aa15.17■□□□□ 0.02
DDX54-204ENST00000546898 TMEM102Q8N9M5 508 aaPredicted RBP15.17■□□□□ 0.02
DDX54-204ENST00000546898 OR56A3Q8NH54 315 aa15.17■□□□□ 0.02
DDX54-204ENST00000546898 PTERQ96BW5 349 aa15.17■□□□□ 0.02
DDX54-204ENST00000546898 THAP11Q96EK4 314 aa15.17■□□□□ 0.02
DDX54-204ENST00000546898 CABS1Q96KC9 395 aa15.17■□□□□ 0.02
DDX54-204ENST00000546898 C10orf90Q96M02 699 aa15.17■□□□□ 0.02
DDX54-204ENST00000546898 LRRC4CQ9HCJ2 640 aa15.17■□□□□ 0.02
DDX54-204ENST00000546898 ACSS2Q9NR19 701 aa15.17■□□□□ 0.02
DDX54-204ENST00000546898 ZDHHC18Q9NUE0 388 aa15.17■□□□□ 0.02
DDX54-204ENST00000546898 BOD1L1Q8NFC6 3051 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 H7BY64 318 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 PRPF4O43172 522 aaKnown RBP eCLIP15.16■□□□□ 0.02
DDX54-204ENST00000546898 CNOT3O75175 753 aaKnown RBP15.16■□□□□ 0.02
DDX54-204ENST00000546898 PIAS1O75925 651 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 WISP3O95389 354 aaPredicted RBP15.16■□□□□ 0.02
DDX54-204ENST00000546898 IGHEP01854 428 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 SPRP35270 261 aaPredicted RBP15.16■□□□□ 0.02
DDX54-204ENST00000546898 CDKL1Q00532 357 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 GUCY2DQ02846 1103 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 KBTBD12Q3ZCT8 623 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 GLE1Q53GS7 698 aaKnown RBP15.16■□□□□ 0.02
DDX54-204ENST00000546898 LACTB2Q53H82 288 aaPredicted RBP15.16■□□□□ 0.02
DDX54-204ENST00000546898 GRTP1Q5TC63 336 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 FAM69BQ5VUD6 431 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 CPZQ66K79 652 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 TCTN3Q6NUS6 607 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 MED25Q71SY5 747 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 COX15Q7KZN9 410 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 MRGPREQ86SM8 312 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 CEP97Q8IW35 865 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 CTAGE3PQ8IX95 158 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 KIF18AQ8NI77 898 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 NACC2Q96BF6 587 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 PRAP1Q96NZ9 151 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 ING2Q9H160 280 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 ZNF304Q9HCX3 659 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 MTRF1LQ9UGC7 380 aaKnown RBP15.16■□□□□ 0.02
DDX54-204ENST00000546898 CDC14AQ9UNH5 594 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 RUVBL1Q9Y265 456 aaKnown RBP15.16■□□□□ 0.02
DDX54-204ENST00000546898 MTO1Q9Y2Z2 717 aaKnown RBP15.16■□□□□ 0.02
DDX54-204ENST00000546898 OARD1Q9Y530 152 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 PCSK5Q92824 1860 aa15.16■□□□□ 0.02
DDX54-204ENST00000546898 KCNE1BA0A087WTH5 132 aa15.15■□□□□ 0.02
DDX54-204ENST00000546898 NPEPPSL1A6NEC2 478 aa15.15■□□□□ 0.02
DDX54-204ENST00000546898 CDC7O00311 574 aa15.15■□□□□ 0.02
DDX54-204ENST00000546898 GUCA1CO95843 209 aa15.15■□□□□ 0.02
DDX54-204ENST00000546898 ANXA5P08758 320 aa15.15■□□□□ 0.02
DDX54-204ENST00000546898 STMN1P16949 149 aa15.15■□□□□ 0.02
DDX54-204ENST00000546898 OTX2P32243 289 aa15.15■□□□□ 0.02
DDX54-204ENST00000546898 GRK3P35626 688 aa15.15■□□□□ 0.02
DDX54-204ENST00000546898 CSNK1G2P78368 415 aa15.15■□□□□ 0.02
DDX54-204ENST00000546898 ATP1A4Q13733 1029 aa15.15■□□□□ 0.02
DDX54-204ENST00000546898 USP10Q14694 798 aaKnown RBP15.15■□□□□ 0.02
DDX54-204ENST00000546898 ZKSCAN8Q15776 578 aaPredicted RBP15.15■□□□□ 0.02
DDX54-204ENST00000546898 NKG7Q16617 165 aa15.15■□□□□ 0.02
DDX54-204ENST00000546898 HKDC1Q2TB90 917 aa15.15■□□□□ 0.02
DDX54-204ENST00000546898 FRA10AC1Q70Z53 315 aa15.15■□□□□ 0.02
DDX54-204ENST00000546898 NOA1Q8NC60 698 aaKnown RBP15.15■□□□□ 0.02
DDX54-204ENST00000546898 FBF1Q8TES7 1133 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms