RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 PRH1P02810 166 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 CBSLP0DN79 551 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 CBSP35520 551 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 THPOP40225 353 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 MAGEA12P43365 314 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 NFE2L1Q14494 772 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 ZNF678Q5SXM1 525 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 FRRS1Q6ZNA5 592 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 PLEKHH3Q7Z736 793 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 CAND1Q86VP6 1230 aaKnown RBP12.47□□□□□ -0.41
PTCH1-212ENST00000546744 PCSK9Q8NBP7 692 aaKnown RBP12.47□□□□□ -0.41
PTCH1-212ENST00000546744 B3GNT5Q9BYG0 378 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 TP63Q9H3D4 680 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-212ENST00000546744 TRPV4Q9HBA0 871 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 ACSL5Q9ULC5 683 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 NEMP2A6NFY4 417 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 C9JVG2 144 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 SULT1B1O43704 296 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 CDC40O60508 579 aaKnown RBP eCLIP12.46□□□□□ -0.41
PTCH1-212ENST00000546744 C22orf31O95567 290 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 ALDOAP04075 364 aaKnown RBP12.46□□□□□ -0.41
PTCH1-212ENST00000546744 CTPS1P17812 591 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 CPN2P22792 545 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 GMPRP36959 345 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 LEPRP48357 1165 aaKnown RBP12.46□□□□□ -0.41
PTCH1-212ENST00000546744 SLC39A12Q504Y0 691 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 C9orf64Q5T6V5 341 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 TMEM236Q5W0B7 351 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 SLC36A4Q6YBV0 504 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 C2CD4AQ8NCU7 369 aaPredicted RBP12.46□□□□□ -0.41
PTCH1-212ENST00000546744 ASB15Q8WXK1 588 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 TCEAL3Q969E4 200 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 S100A16Q96FQ6 103 aaKnown RBP12.46□□□□□ -0.41
PTCH1-212ENST00000546744 BORCS6Q96GS4 357 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 TTYH2Q9BSA4 534 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 OSGEPL1Q9H4B0 414 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 MRTO4Q9UKD2 239 aaKnown RBP12.46□□□□□ -0.41
PTCH1-212ENST00000546744 MRPS33Q9Y291 106 aaKnown RBP12.46□□□□□ -0.41
PTCH1-212ENST00000546744 TLR6Q9Y2C9 796 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 IGKV6D-41A0A0C4DH26 115 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 A0A1B0GVG6 124 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 E9PAM4 449 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 RCBTB2O95199 551 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 RETP07949 1114 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 DAOAP59103 153 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 PFKPQ01813 784 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 SLC13A2Q13183 592 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 IRAK1BP1Q5VVH5 260 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 PGM2L1Q6PCE3 622 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 BLOC1S3Q6QNY0 202 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 ZNF615Q8N8J6 731 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 RTP4Q96DX8 246 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 ERLEC1Q96DZ1 483 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 KCNC2Q96PR1 638 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 UNKLQ9H9P5 680 aaKnown RBP12.46□□□□□ -0.41
PTCH1-212ENST00000546744 AIG1Q9NVV5 245 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 ZNF69Q9UC07 566 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 IKZF2Q9UKS7 526 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 COL4A1P02462 1669 aa12.46□□□□□ -0.41
PTCH1-212ENST00000546744 EPOP01588 193 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 ENGP17813 658 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 ARF4P18085 180 aaPredicted RBP12.46□□□□□ -0.42
PTCH1-212ENST00000546744 PRKCDQ05655 676 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 HNRNPA0Q13151 305 aaKnown RBP12.46□□□□□ -0.42
PTCH1-212ENST00000546744 GRB14Q14449 540 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 PON3Q15166 354 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 SPHARQ15513 63 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 PLEKHN1Q494U1 663 aaPredicted RBP12.46□□□□□ -0.42
PTCH1-212ENST00000546744 JAZF1Q86VZ6 243 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 ATCAYQ86WG3 371 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 PAPD5Q8NDF8 572 aaKnown RBP12.46□□□□□ -0.42
PTCH1-212ENST00000546744 OR10H4Q8NGA5 316 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 OR6Q1Q8NGQ2 317 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 RNF31Q96EP0 1072 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 HSPA12BQ96MM6 686 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 DHRS4Q9BTZ2 278 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 LHPPQ9H008 270 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 XPNPEP1Q9NQW7 623 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 TMEM184CQ9NVA4 438 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 RIMS3Q9UJD0 308 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 PCDHGA4Q9Y5G9 962 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 ARAP2Q8WZ64 1704 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 KIAA0513O60268 411 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 ATG13O75143 517 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 ITGA3P26006 1051 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 LRRN1Q6UXK5 716 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 ZNF782Q6ZMW2 699 aaPredicted RBP12.46□□□□□ -0.42
PTCH1-212ENST00000546744 NLGN2Q8NFZ4 835 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 TRIB3Q96RU7 358 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 FN3KQ9H479 309 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 RETREG1Q9H6L5 497 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 IFT46Q9NQC8 304 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 VPS29Q9UBQ0 182 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 RAI2Q9Y5P3 530 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 ATRNL1Q5VV63 1379 aa12.46□□□□□ -0.42
PTCH1-212ENST00000546744 ERAL1O75616 437 aaKnown RBP12.45□□□□□ -0.42
PTCH1-212ENST00000546744 NPRL3Q12980 569 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 SLC35F1Q5T1Q4 408 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 RNF180Q86T96 592 aa12.45□□□□□ -0.42
PTCH1-212ENST00000546744 GID4Q8IVV7 300 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms