RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 TFEBP19484 476 aa17.12■□□□□ 0.33
TSFM-208ENST00000543727 GCGRP47871 477 aa17.12■□□□□ 0.33
TSFM-208ENST00000543727 SLC6A12P48065 614 aa17.12■□□□□ 0.33
TSFM-208ENST00000543727 GPS2Q13227 327 aa17.12■□□□□ 0.33
TSFM-208ENST00000543727 RASA2Q15283 850 aa17.12■□□□□ 0.33
TSFM-208ENST00000543727 OR4D1Q15615 310 aa17.12■□□□□ 0.33
TSFM-208ENST00000543727 PTCHD3Q3KNS1 767 aa17.12■□□□□ 0.33
TSFM-208ENST00000543727 TIFABQ6ZNK6 161 aa17.12■□□□□ 0.33
TSFM-208ENST00000543727 ADCK2Q7Z695 626 aa17.12■□□□□ 0.33
TSFM-208ENST00000543727 ZNF655Q8N720 491 aaPredicted RBP17.12■□□□□ 0.33
TSFM-208ENST00000543727 PRORYQ9H606 182 aa17.12■□□□□ 0.33
TSFM-208ENST00000543727 PCMTD2Q9NV79 361 aa17.12■□□□□ 0.33
TSFM-208ENST00000543727 GPRC5BQ9NZH0 403 aa17.12■□□□□ 0.33
TSFM-208ENST00000543727 CFAP47Q6ZTR5 3102 aa17.12■□□□□ 0.33
TSFM-208ENST00000543727 A0A0J9YVX5 310 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 A0A1B0GX78 115 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 ZNF891A8MT65 544 aaPredicted RBP17.11■□□□□ 0.33
TSFM-208ENST00000543727 TERTO14746 1132 aaKnown RBP17.11■□□□□ 0.33
TSFM-208ENST00000543727 EFSO43281 561 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 RAB40ALP0C0E4 278 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 DEKP35659 375 aaKnown RBP17.11■□□□□ 0.33
TSFM-208ENST00000543727 DLSTP36957 453 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 CCR8P51685 355 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 VSNL1P62760 191 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 DLG1Q12959 904 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 ZXDCQ2QGD7 858 aaPredicted RBP17.11■□□□□ 0.33
TSFM-208ENST00000543727 COL28A1Q2UY09 1125 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 GARNL3Q5VVW2 1013 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 ZNF385CQ66K41 422 aaPredicted RBP17.11■□□□□ 0.33
TSFM-208ENST00000543727 FBXO42Q6P3S6 717 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 GPR155Q7Z3F1 870 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 VASH2Q86V25 355 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 THOC6Q86W42 341 aaKnown RBP17.11■□□□□ 0.33
TSFM-208ENST00000543727 SLC38A9Q8NBW4 561 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 OR4K1Q8NGD4 311 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 UHMK1Q8TAS1 419 aaKnown RBP17.11■□□□□ 0.33
TSFM-208ENST00000543727 UBLCP1Q8WVY7 318 aaPredicted RBP17.11■□□□□ 0.33
TSFM-208ENST00000543727 SLC5A11Q8WWX8 675 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 PYCR2Q96C36 320 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 MVB12AQ96EY5 273 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 TSNARE1Q96NA8 513 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 OR2A5Q96R48 311 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 OR4K3Q96R72 315 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 ATOH8Q96SQ7 321 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 NLNQ9BYT8 704 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 PITHD1Q9GZP4 211 aaPredicted RBP17.11■□□□□ 0.33
TSFM-208ENST00000543727 SPRTNQ9H040 489 aaPredicted RBP17.11■□□□□ 0.33
TSFM-208ENST00000543727 ALG9Q9H6U8 611 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 PELI2Q9HAT8 420 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 ABCF3Q9NUQ8 709 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 CUEDC1Q9NWM3 386 aaPredicted RBP17.11■□□□□ 0.33
TSFM-208ENST00000543727 WWOXQ9NZC7 414 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 CD274Q9NZQ7 290 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 CROTQ9UKG9 612 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 TMCO1Q9UM00 188 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 DYRK1BQ9Y463 629 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 PCDHGA4Q9Y5G9 962 aa17.11■□□□□ 0.33
TSFM-208ENST00000543727 DSPP15924 2871 aaKnown RBP17.11■□□□□ 0.33
TSFM-208ENST00000543727 LOC101059948A0A1B0GTJ6 334 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 TEX51A0A1B0GUA7 166 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 TRIM49D1C9J1S8 452 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 C9J4A7 227 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 H7BY64 318 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 DSCR3O14972 297 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 ONECUT2O95948 504 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 RBP1P09455 135 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 PIM1P11309 404 aaPredicted RBP17.1■□□□□ 0.33
TSFM-208ENST00000543727 GNAZP19086 355 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 TCN2P20062 427 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 GCAP28676 217 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 VSX2P58304 361 aaPredicted RBP17.1■□□□□ 0.33
TSFM-208ENST00000543727 RPS15P62841 145 aaKnown RBP17.1■□□□□ 0.33
TSFM-208ENST00000543727 YBX1P67809 324 aaKnown RBP17.1■□□□□ 0.33
TSFM-208ENST00000543727 CXADRP78310 365 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 CSNK1G2P78368 415 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 DNASE1L3Q13609 305 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 WASHC2DQ5SRD0 308 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 METTL2BQ6P1Q9 378 aaKnown RBP17.1■□□□□ 0.33
TSFM-208ENST00000543727 LRRC70Q7Z2Q7 622 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 TDRPQ86YL5 185 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 SPATA6LQ8N4H0 392 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 ACMSDQ8TDX5 336 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 UBTD2Q8WUN7 234 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 KCTD4Q8WVF5 259 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 MR1Q95460 341 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 ALKBH8Q96BT7 664 aaKnown RBP17.1■□□□□ 0.33
TSFM-208ENST00000543727 NXNL1Q96CM4 212 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 PRAP1Q96NZ9 151 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 GBP5Q96PP8 586 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 PTBP2Q9UKA9 531 aaKnown RBP17.1■□□□□ 0.33
TSFM-208ENST00000543727 LAMA5O15230 3695 aa17.1■□□□□ 0.33
TSFM-208ENST00000543727 H0YGG7 62 aa17.09■□□□□ 0.33
TSFM-208ENST00000543727 HAT1O14929 419 aa17.09■□□□□ 0.33
TSFM-208ENST00000543727 WDR47O94967 919 aa17.09■□□□□ 0.33
TSFM-208ENST00000543727 CDH1P12830 882 aa17.09■□□□□ 0.33
TSFM-208ENST00000543727 CXCR2P25025 360 aa17.09■□□□□ 0.33
TSFM-208ENST00000543727 GSTM2P28161 218 aa17.09■□□□□ 0.33
TSFM-208ENST00000543727 ARF3P61204 181 aaPredicted RBP17.09■□□□□ 0.33
TSFM-208ENST00000543727 DCDP81605 110 aaKnown RBP17.09■□□□□ 0.33
TSFM-208ENST00000543727 MUM1Q2TAK8 710 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms