RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 KCNK13Q9HB14 408 aa4.52□□□□□ -1.69
LIMS1-214ENST00000542845 MAGEE1Q9HCI5 957 aa4.52□□□□□ -1.69
LIMS1-214ENST00000542845 IL26Q9NPH9 171 aa4.52□□□□□ -1.69
LIMS1-214ENST00000542845 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.52□□□□□ -1.69
LIMS1-214ENST00000542845 RIC8BQ9NVN3 520 aa4.52□□□□□ -1.69
LIMS1-214ENST00000542845 ALKBH4Q9NXW9 302 aa4.52□□□□□ -1.69
LIMS1-214ENST00000542845 TRPC4Q9UBN4 977 aa4.52□□□□□ -1.69
LIMS1-214ENST00000542845 ZC3H7BQ9UGR2 993 aaKnown RBP4.52□□□□□ -1.69
LIMS1-214ENST00000542845 CBLCQ9ULV8 474 aa4.52□□□□□ -1.69
LIMS1-214ENST00000542845 ICKQ9UPZ9 632 aa4.52□□□□□ -1.69
LIMS1-214ENST00000542845 SPO11Q9Y5K1 396 aa4.52□□□□□ -1.69
LIMS1-214ENST00000542845 ALG6Q9Y672 507 aa4.52□□□□□ -1.69
LIMS1-214ENST00000542845 SNRNP200O75643 2136 aaKnown RBP4.52□□□□□ -1.69
LIMS1-214ENST00000542845 NSD1Q96L73 2696 aaPredicted RBP4.51□□□□□ -1.69
LIMS1-214ENST00000542845 GLYATL1P3A0A0U1RQE8 302 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 HYKKA2RU49 373 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 ASPDHA6ND91 283 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 VSTM2BA6NLU5 285 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 ADARB2-AS1A8MUL3 147 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 NPIPA2E9PIF3 369 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 NPIPA3F8WFD2 350 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 KCNK1O00180 336 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 HS6ST1O60243 411 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 SUSD5O60279 629 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 SMPD2O60906 423 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 MMP2P08253 660 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 CHRM5P08912 532 aaPredicted RBP4.51□□□□□ -1.69
LIMS1-214ENST00000542845 NAT2P11245 290 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 NID1P14543 1247 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 CD53P19397 219 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 CCNCP24863 283 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 SSR1P43307 286 aaKnown RBP4.51□□□□□ -1.69
LIMS1-214ENST00000542845 ZFP36L2P47974 494 aaKnown RBP4.51□□□□□ -1.69
LIMS1-214ENST00000542845 KLK7P49862 253 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 POLR2FP61218 127 aaKnown RBP4.51□□□□□ -1.69
LIMS1-214ENST00000542845 AP2B1P63010 937 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 SLC7A5Q01650 507 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 KRT81Q14533 505 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 PTPRCAPQ14761 206 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 GRM7Q14831 915 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 NOMO1Q15155 1222 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 IFI16Q16666 785 aaKnown RBP4.51□□□□□ -1.69
LIMS1-214ENST00000542845 MAN2A1Q16706 1144 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 MEP1AQ16819 746 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 FAM214AQ32MH5 1076 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 GXYLT1Q4G148 440 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 FLYWCH1Q4VC44 716 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 WASHC2DQ5SRD0 308 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 TIGD7Q6NT04 549 aaPredicted RBP4.51□□□□□ -1.69
LIMS1-214ENST00000542845 DPY19L2P1Q6NXN4 242 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 UNC5DQ6UXZ4 953 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 MON1BQ7L1V2 547 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 YTHDF3Q7Z739 585 aaKnown RBP4.51□□□□□ -1.69
LIMS1-214ENST00000542845 TAX1BP1Q86VP1 789 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 CRLF3Q8IUI8 442 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 MCOLN2Q8IZK6 566 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 SLC25A41Q8N5S1 370 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 HORMAD2Q8N7B1 307 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 MDS2Q8NDY4 140 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 OR5AR1Q8NGP9 310 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 ZNF398Q8TD17 642 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 TFGQ92734 400 aaPredicted RBP4.51□□□□□ -1.69
LIMS1-214ENST00000542845 DCUN1D1Q96GG9 259 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 CSPG4P5Q96PW8 444 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 SECISBP2Q96T21 854 aaKnown RBP4.51□□□□□ -1.69
LIMS1-214ENST00000542845 SELENOSQ9BQE4 189 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 SPATA9Q9BWV2 254 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 TRIM7Q9C029 511 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 ZNF700Q9H0M5 742 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 FAM96AQ9H5X1 160 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 BEX4Q9NWD9 120 aaPredicted RBP4.51□□□□□ -1.69
LIMS1-214ENST00000542845 IL1RAPL1Q9NZN1 696 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 MYO1AQ9UBC5 1043 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 CIDEBQ9UHD4 219 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 MKL2Q9ULH7 1088 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 SCN2AQ99250 2005 aa4.51□□□□□ -1.69
LIMS1-214ENST00000542845 A0A0G2JNJ9 132 aa4.5□□□□□ -1.69
LIMS1-214ENST00000542845 TCRBV5S1A1TA0A578 114 aa4.5□□□□□ -1.69
LIMS1-214ENST00000542845 GABRR3A8MPY1 467 aa4.5□□□□□ -1.69
LIMS1-214ENST00000542845 SLC16A5O15375 505 aa4.5□□□□□ -1.69
LIMS1-214ENST00000542845 PHF1O43189 567 aaPredicted RBP4.5□□□□□ -1.69
LIMS1-214ENST00000542845 KCNAB3O43448 404 aa4.5□□□□□ -1.69
LIMS1-214ENST00000542845 MFSD11O43934 449 aa4.5□□□□□ -1.69
LIMS1-214ENST00000542845 DNAJB6O75190 326 aa4.5□□□□□ -1.69
LIMS1-214ENST00000542845 SUN1O94901 812 aa4.5□□□□□ -1.69
LIMS1-214ENST00000542845 MED26O95402 600 aa4.5□□□□□ -1.69
LIMS1-214ENST00000542845 TP53P04637 393 aaPredicted RBP4.5□□□□□ -1.69
LIMS1-214ENST00000542845 TCF4P15884 667 aa4.5□□□□□ -1.69
LIMS1-214ENST00000542845 BMP7P18075 431 aa4.5□□□□□ -1.69
LIMS1-214ENST00000542845 TFEBP19484 476 aa4.5□□□□□ -1.69
LIMS1-214ENST00000542845 TACR1P25103 407 aa4.5□□□□□ -1.69
LIMS1-214ENST00000542845 IL1R2P27930 398 aa4.5□□□□□ -1.69
LIMS1-214ENST00000542845 SHMT2P34897 504 aa4.5□□□□□ -1.69
LIMS1-214ENST00000542845 SOX5P35711 763 aa4.5□□□□□ -1.69
LIMS1-214ENST00000542845 GJC1P36383 396 aa4.5□□□□□ -1.69
LIMS1-214ENST00000542845 PRKCIP41743 596 aa4.5□□□□□ -1.69
LIMS1-214ENST00000542845 NR0B1P51843 470 aaKnown RBP4.5□□□□□ -1.69
LIMS1-214ENST00000542845 ZNF135P52742 658 aaPredicted RBP4.5□□□□□ -1.69
LIMS1-214ENST00000542845 GSCP56915 257 aaPredicted RBP4.5□□□□□ -1.69
LIMS1-214ENST00000542845 MAMLD1Q13495 774 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms