RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 KLF2Q9Y5W3 355 aaPredicted RBP7.77□□□□□ -1.16
PDLIM5-221ENST00000542407 TRBV23OR9-2A0A075B6M9 112 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 A0A096LPK6 155 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 DHRS12A0PJE2 317 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 ARGFXA6NJG6 315 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 F8W036 122 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 G3V2L1 256 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 GRID2O43424 1007 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 CDC123O75794 336 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 SEC14L2O76054 403 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 MPOP05164 745 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 C2P06681 752 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 SBK3P0C264 359 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 SLC35E2BP0CK96 405 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 LEPRP48357 1165 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 CDKN1CP49918 316 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 ARF5P84085 180 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 CTBP1Q13363 440 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 ZNF235Q14590 738 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 REP15Q6BDI9 236 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 MZT2BQ6NZ67 158 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 IFNEQ86WN2 208 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 CAMKK1Q8N5S9 505 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 BEND7Q8N7W2 519 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 ARL14EPQ8N8R7 260 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 MFSD2AQ8NA29 543 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 LEMD2Q8NC56 503 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 OR5H6Q8NGV6 325 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 WFDC5Q8TCV5 224 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 ALG14Q96F25 216 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 MS4A3Q96HJ5 214 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 MUS81Q96NY9 551 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 CHID1Q9BWS9 393 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 GPN2Q9H9Y4 310 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 NMRAL1Q9HBL8 299 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 SRA1Q9HD15 236 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 AKIP1Q9NQ31 210 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 SMPD3Q9NY59 655 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 GTSE1Q9NYZ3 720 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 PCDHB3Q9Y5E6 796 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 HELZP42694 1942 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 PTGES3LE9PB15 166 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 MRASO14807 208 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 RFPL2O75678 378 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 SRP72O76094 671 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 EPOP01588 193 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 UGT2B4P06133 528 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 RHOCP08134 193 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 RPS17P08708 135 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 STARP49675 285 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 SMAD3P84022 425 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 STX5Q13190 355 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 LTB4RQ15722 352 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 SWI5Q1ZZU3 235 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 ZNF789Q5FWF6 425 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 C6orf10Q5SRN2 563 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 SUSD1Q6UWL2 747 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 ZNF783Q6ZMS7 281 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 ASPGQ86U10 573 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 CEP97Q8IW35 865 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 TSPEARQ8WU66 669 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 S100ZQ8WXG8 99 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 CCDC120Q96HB5 630 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 MAGED4Q96JG8 741 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 TNKS2Q9H2K2 1166 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 TASP1Q9H6P5 420 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 NEUROD4Q9HD90 331 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 HPF1Q9NWY4 346 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 CACNA2D2Q9NY47 1150 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 KCTD3Q9Y597 815 aa7.77□□□□□ -1.17
PDLIM5-221ENST00000542407 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 LCHNA4D1U4 455 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 A8MV72 311 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 ERVH48-1M5A8F1 160 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 MEN1O00255 615 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 TSPAN4O14817 238 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 TBX1O43435 398 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 DYRK3O43781 588 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 PLOD3O60568 738 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 GSNP06396 782 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 IL7RP16871 459 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 HLA-DPA1P20036 260 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 RPS9P46781 194 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 SLC7A9P82251 487 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 LIPEQ05469 1076 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 ZNF177Q13360 481 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 FASTKQ14296 549 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 INPP5AQ14642 412 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 SAMD4BQ5PRF9 694 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 TMEM240Q5SV17 173 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 RNF219Q5W0B1 726 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 ZNF470Q6ECI4 717 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 ARSKQ6UWY0 536 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 LYPD8Q6UX82 237 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 PAGE2Q7Z2X7 111 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 NUP54Q7Z3B4 507 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 CENPLQ8N0S6 344 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 TAGAPQ8N103 731 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 OR7A2PQ8NGA2 310 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms